Admixture, genetics.ucla.edu/software/admixture, Simons Genome Diversity Project SGDP, cteam_extended.v4.maf0.1perc, bcftools/plink, K = 6, "SampleName" = 0.000010 0.963001 0.000010 0.036959 0.000010 0.000010.
[ I ] [ II ] [ III: K 2 ] [ III: K 11 ] [ III: K 20 ] [ III: K 50 ] [ III: K 64 ]
I. Without Geno, Maf, LD Pruning: RAW
Admixture, genetics.ucla.edu/software/admixture, Simons Genome Diversity Project SGDP, cteam_extended.v4.maf0.1perc, bcftools/plink, K = 6, "SampleName" = 0.000010 0.963001 0.000010 0.036959 0.000010 0.000010.
Cluster 0 (Ozeanien / Australo-Melanesien) ~ 0 % (Papuan 0.9999, Australian 0.8124, Bougainville 0.6762, Onge 0.1970, Kurumba 0.1393)
Cluster 1 (West- / Südeuropa) ~ 96,3% (Sardinian 0.9960, Basque 0.9957, Bergamo 0.9867, Albanian 0.9862, Greek 0.9843)
Cluster 2 (Ostasiatisch) ~ 0% (Ami 1.0000, Atayal 1.0000, She 1.0000, Tujia 1.0000, Igorot 0.9991)
Cluster 3 (Amerindian) ~ 3,7% (Mixe 1.0000, Pima 1.0000, Karitiana 0.9999, Nahua 0.9999, Surui 0.9999)
Cluster 4 (Südafrika) ~ 0% (Ju_hoan_North 1.0000, Khomani_San 1.0000, Mbuti 0.6542, Bakola 0.4481, Biaka 0.4421)
Cluster 6 (Westafrika) ~ 0% (Mada 0.9988, Dinka 0.9885, Yoruba 0.9777, Mandenka 0.9747).
Admixture, K = 11, SGDP, "SampleName" = 0.000010 0.000010 0.000010 0.831886 0.000010 0.000010 0.000010 0.006536 0.161499 0.000010 0.000010.
Cluster 0 ~ 0% (Ami, 0.9999, Atayal 0.9999, Igorot 0.9999, Dusun 0.9929, Hawaiian 0.9110)
Cluster 1 ~ 0% (Esan 0.9999, Yoruba 0.9999, Igbo 0.9912, Lemande 0.9851, Mandenka 0.9785)
Cluster 2 ~ 0% (Mala 0.9691, Irula 0.9571, Madiga 0.9235, Kurumba 0.8787, Relli 0.8658)
Cluster 3 ~ 83,19% (Norwegian 0.9911, Estonian 0.9799, Finnish 0.9358, Icelandic 0.9078, Orcadian 0.8769)
Cluster 4 ~ 0% (Ju_hoan_North 0.9999, Khomani_San 0.9999, Mbuti 0.6203, Bakola 0.4056, Biaka 0.3967)
Cluster 5 ~ 0% (Papuan 0.9999, Australian 0.7861, Bougainville 0.6587, Onge 0.1231, Maori 0.0958)
Cluster 6 ~ 0% (Mursi 0.9650, Sengwer 0.8921, Ogiek 0.8049, Aari 0.7478, Masai 0.7477)
Cluster_7 ~ 0,65% (Chane 0.9999, Piapoco 0.9999, Surui 0.9999, Mixe 0.9999, Karitiana 0.9999)
Cluster 8 ~ 16,15% (Samaritan 0.9928, BedouinB 0.9508, Yemenite_Jew 0.9291, Druze 0.7475, Iraqi_Jew 0.7454)
Cluster 9 ~ 0% (Oroqen 0.9224, Ulchi 0.8922, Yakut 0.8564, Even 0.8382, Hezhen 0.7743)
Cluster 10 ~ 0% (Eskimo_Chaplin 0.9999, Eskimo_Naukan 0.9999, Eskimo_Sireniki 0.9999, Itelman 0.6028, Chipewyan 0.5137).
Admixture, K = 20, SGDP, "SampleName" = 0.000010 0.000010 0.000010 0.825525 0.000010 0.158167 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.008107 0.000010 0.008040 0.000010 0.000010 0.000010.
Cluster 0 ~ 0% (Iraqw 0.9998, Aari 0.8774, Somali 0.7323, Hadza 0.6886, Agaw 0.6769)
Cluster 1 ~ 0% (Kalesh 0.7876, Tajik 0.7241, Makrani 0.7116, Balochi 0.6682, Abkhasian 0.6515)
Cluster 2 ~ 0% (Pima, Mixe, Zapotec, Nahua, Mayan)
Cluster 3 ~ 82,55% (Norwegian 0.9722, Estonian 0.9493, Finnish 0.9173, Icelandic 0.8834, English 0.8525)
Cluster 4 ~ 0% (Australian 0.8717, Bougainville 0.3107, Hawaiian 0.0468, Maori 0.0345, Khonda_Dora 0.0297)
Cluster 5 ~ 15,82% (Samaritan 0.9998, BedouinB 0.9998, Yemenite_Jew 0.9998, Jordanian 0.5759, Druze 0.5471)
Cluster 6 ~ 0% (Papuan 0.9998, Bougainville 0.4377, Australian 0.1281, Maori 0.0699, Hawaiian 0.0320)
Cluster 7 ~ 0% (Mozabite 0.9998, Saharawi 0.6721, Fulani 0.3988, Spanish 0.0486, Bulala 0.0478)
Cluster 8 ~ 0% (Yoruba 0.9998, Esan 0.9911, Mandenka 0.9888, Igbo 0.9729, Mende 0.9645)
Cluster 9 ~ 0% (Mala 0.9998, Irula 0.9984, Madiga 0.9618, Kurumba 0.9250, Relli 0.8644)
Cluster 10 ~ 0% (Oroqen 0.9758, Ulchi 0.9531, Yakut 0.9032, Even 0.9014, Hezhen 0.7829)
Cluster 11 ~ 0% (Eskimo_Naukan 0.9998, Eskimo_Sireniki 0.9998, Eskimo_Chaplin 0.9998, Itelman 0.5727, Chipewyan 0.4724)
Cluster 12 ~ 0% (Mursi 0.9998, Dinka 0.9998, Bulala 0.7415, Sengwer 0.5231, Mada 0.3925)
Cluster 13 ~ 0% (Igorot 0.9998, Ami 0.9998, Atayal 0.9998, Dusun 0.9811, Hawaiian 0.9020), Cluster 14 ~ 0,81% (Surui 0.9998, Karitiana 0.9998, Piapoco 0.2598, Chane 0.2338, Quechua 0.1257)
Cluster 15 ~ 0% (Biaka 0.9998, Bedzan 0.9998, Bakola 0.9998, Baka 0.9998, Ngumba 0.1665)
Cluster 16 ~ 0,80% (Onge 0.9998, Cambodian 0.0345, Kurumba 0.0279, Khonda_Dora 0.0244, Thai 0.0200)
Cluster 17 ~ 0% (Kusunda 0.9998, Sherpa 0.1257, Tibetan 0.1113, Naxi 0.0634, Tu 0.0491)
Cluster 18 ~ 0% (Mbuti 0.9998, Aari 0.0432, Hadza 0.0324, Luo 0.0281, Sandawe 0.0262)
Cluster 19 ~ 0% (Khomani_San 0.9998, Ju_hoan_North 0.9998, BantuTswana 0.2412, Sandawe 0.0934, BantuHerero 0.0610).
Admixture, K = 30, SGDP, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.213132 0.000010 0.000010 0.000010 0.768875 0.000010 0.000010 0.000010 0.010000 0.000010 0.000010 0.000010 0.000010 0.000010 0.002924 0.000010 0.000010 0.000010 0.000010 0.000010 0.004819 0.000010 0.000010 0.000010 0.000010 0.000010.
Cluster 0 ~ 0% (Sandawe 0.9997, Hadza 0.584, Iraqw 0.1902, Aari 0.1623, Ogiek 0.0854)
Cluster 1 ~ 0% (Mursi 0.9997, Dinka 0.9997, Sengwer 0.5014, Bulala 0.4711)
Cluster 2 ~ 0% (Mixe 0.9997, Pima 0.9997, Zapotec 0.6356, Nahua 0.6235, Mixtec 0.5394)
Cluster3 ~ 0% (Fulani 0.9997, Saharawi 0.1149, Mozabite 0.0928, Gambian 0.0612, Mandenka 0.0356)
Cluster 4 [LEV] ~ 21,31% (Samaritan 0.987851, Yemenite_Jew 0.758152, Druze 0.753707, Iraqi_Jew 0.712152, Sardinian 0.687419, Armenian 0.681763, Palestinian 0.646454)
Cluster 5 ~ 0% (Aleut 0.9997, Tlingit 0.7013, Maori 0.0391, Chukchi 0.0354, Russian 0.0289, Cree 0.0252, North_Ossetian 0.025)
Cluster 6 ~ 0% (Esan 0.9997, Mende 0.9794, Mandenka 0.964, Yoruba 0.9583, Igbo 0.9225)
Cluster 7 (Ami 0.9997, Atayal 0.9997, Igorot 0.9997, Hawaiian 0.9175, Dusun 0.6632)
Cluster 8 [EUR] ~ 76,89% (Estonian 0.985957, Norwegian 0.985515, Finnish 0.945120, Icelandic 0.864584, Orcadian 0.819932, English 0.793617, Russian 0.792574)
Cluster 9 ~ 0% (Mala 0.9997, Irula 0.9961, Madiga 0.9343, Kurumba 0.9209, Relli 0.8439)
Cluster 10 ~ 0% (Papuan 0.6181, Australian 0.089, Kharia 0.0095, Mansi 0.0046, Madiga 0.0036)
Cluster 11 ~ 0% (Bougainville 0.9997, Hawaiian 0.0651, Australian 0.0621, Maori 0.0569, Thai 0.0086)
Cluster 12 [Byzanz-Levante-Drift] ~ 1,0% (Jordanian 0.339505, Czech 0.011071, [SampleName] 0.010000, Kashmiri_Pandit 0.008271, Hungarian 0.007707, Palestinian 0.007296, Greek 0.006167)
Cluster 13 ~ 0% (Eskimo_Sireniki 0.9997, Eskimo_Naukan 0.9997, Eskimo_Chaplin 0.9997, Itelman 0.537, Chipewyan 0.4667)
Cluster 14 ~ 0% (Kusunda 0.9997, Kharia 0.0122, Bengali 0.012, Polish 0.0107, Hazara 0.008)
Cluster 15 ~ 0% (BantuHerero 0.9997, Lemande 0.5868, Gambian 0.4999, Luhya 0.2735, BantuKenya 0.2555)
Cluster 16 (Bakola 0.9997, Biaka 0.9997, Baka 0.9997, Bedzan 0.9997, Ngumba 0.1447)
Cluster 17 ~ 0% (Balochi 0.9997, Kalash 0.9997, Makrani 0.5227, Tajik 0.4812, Brahui 0.4576)
Cluster 18 [LATAM-Steppe-Drift Silk Road I] ~ 0,29% (Karitiana 0.999710, Surui 0.999707, Chane 0.163107, Piapoco 0.056315, Iranian 0.009381, Uygur 0.008866, Mayan 0.007531)
Cluster 19 ~ 0% (Sherpa 0.9997, Tibetan 0.9997, Naxi 0.4121, Tu 0.3898, Yi 0.3798, Korean 0.265)
Cluster 20 ~ 0% (Papuan 0.3816, Maori 0.0485, Australian 0.0227, Kurumba 0.0133, Cambodian 0.0087)
Cluster 21 ~ 0% (Mbuti 0.9997, Aari 0.0285, Luo 0.0223, BantuKenya 0.0185, Sengwer 0.015)
Cluster 22 ~ 0% (Somali 0.9997, Rendille 0.9997, Iraqw 0.8034, Agaw 0.7244, Amhara 0.6792)
Cluster 23 ~ 0% (Oroqen 0.9997, Yakut 0.9968, Ulchi 0.9967, Even 0.9537, Hezhen 0.6401)
Cluster 24 [ASI-Himalaya-Drift Silk Road II] ~ 0,48% (Onge 0.999710, Cambodian 0.031536, Kurumba 0.026533, Khonda_Dora 0.023565, Thai 0.018750, Kharia 0.016607, Burmese 0.016598)
Cluster 25 ~ 0% (Australian 0.8259, Khonda_Dora 0.026, Hawaiian 0.0172, Maori 0.0139, Kurumba 0.0083)
Cluster 26 ~ 0% (Dai 0.9997, Kinh 0.9718, Lahu 0.9441, Thai 0.827, Miao 0.7984)
Cluster 27 (BedouinB 0.999710, Yemenite_Jew 0.095636, Palestinian 0.059841, Saharawi 0.058470, Agaw 0.029294, Jordanian 0.025385, Crete 0.021454)
Cluster 28 ~ 0% (Quechua 0.9997, Piapoco 0.9434, Chane 0.6128, Mayan 0.6118)
Cluster 29 ~ 0% (Khomani_San 0.9997, Ju_hoan_North 0.9997, BantuTswana 0.2312, Aari 0.057).
Admixture, K = 40, SGDP, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.176566 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.016768 0.769477 0.015940 0.000010 0.000574 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000993 0.000010 0.019351 0.000010 0.000010 0.000010.
Cluster 0 [CAUCASUS MIZR] ~ 0% (Georgian 0.99961, Abkhasian 0.99607, Adygei 0.77901, Armenian 0.75444, North_Ossetian 0.75428, Lezgin 0.65089, Iranian 0.61723)
Cluster 1 [MAGHREB MIZR] ~ 0% (Mozabite 0.99961, Saharawi 0.65811, Spanish 0.04684, Amhara 0.04211, Bulala 0.04029, Druze 0.03640, Palestinian 0.03284)
Cluster 2 ~ 0% (Chipewyan 0.9996, Cree 0.1974, Chechen 0.0251, Tubalar 0.0147, Bengali 0.0096)
Cluster 3 ~ 0% (Punjabi 0.8021, Brahmin 0.5686, Balochi 0.2973, Makrani 0.2481, Madiga 0.2070)
Cluster 4 ~ 0% (Sherpa 0.9996, Tibetan 0.7297, Naxi 0.2809, Tu 0.2647, Yi 0.2598, Burmese 0.1704, Korean 0.1424)
Cluster 5 ~ 0% (Papuan 0.6479, Australian 0.0974, Kharia 0.0069, Mansi 0.005)
Cluster 6 ~ 0% (Australian 0.8262, Khonda_Dora 0.0252, Hawaiian 0.0223, Maori 0.0149, Chechen 0.008)
Cluster 7 ~ 0% (Pima 0.9996, Cree 0.0425, Nahua 0.0399, Mixtec 0.0217, Mayan 0.01)
Cluster 8 ~ 0% (Kusunda 0.9996, Bengali 0.0131, Kharia 0.0109, Hazara 0.0094, Burmese 0.0093)
Cluster 9 ~ 0% (Papuan 0.3518, Maori 0.0446, Australian 0.0139, Cambodian 0.0094, Kurumba 0.0085)
Cluster 10 ~ 0% (Bedzan 0.9996, Baka 0.7875, Kongo 0.1165, Ngumba 0.0937, Tikar_South 0.0666)
Cluster 11 ~ 0% (Khomani_San 0.9996, Ju_hoan_North 0.9996, BantuTswana 0.2437, Aari 0.0741, Hadza 0.0586)
Cluster 12 [EUR I WEST MED] ~ 17,66% (Basque 0.99961, Sardinian 0.99961, Spanish 0.38823, Bergamo 0.33952, Albanian 0.32354, Tuscan 0.26842, Bulgarian 0.24872)
Cluster 13 ~ 0% (Oroqen 0.9996, Yakut 0.9996, Ulchi 0.9996, Even 0.9461, Hezhen 0.6477); Cluser 14 ~ 0% (Daur 0.5866, Kyrgyz 0.5115, Altaian 0.1298, Tubalar 0.1032, Xibo 0.0909, Mongola 0.0813)
Cluster 15 ~ 0% (Biaka 0.9996, Bakola 0.9996, Baka 0.2121, Hadza 0.0556, Luhya 0.0448)
Cluster 16 ~ 0% (Bougainville 0.9996, Hawaiian 0.0681, Australian 0.0621, Maori 0.0576, Thai 0.0081, Uygur 0.0055)
Cluster 17 ~ 0% (Kalash 0.9996, Tajik 0.5642, Burusho 0.0939, Balochi 0.0919, Kashmiri_Pandit 0.084)
Cluster 18 ~ 0% (Saami 0.9996, Mansi 0.0755, Finnish 0.0601, Russian 0.0479, Hazara 0.0258)
Cluster 19 ~ 0% (Eskimo_Sireniki 0.9996, Eskimo_Naukan 0.9996, Eskimo_Chaplin 0.9996, Itelman 0.5305, Chukchi 0.3237)
Cluster 20 ~ 0% (Lahu 0.9922, Miao 0.909, Tujia 0.9049, She 0.8863, Dai 0.862)
Cluster 21 [LEV I BYZANZ] ~ 1,68% (Jordanian 0.66641, Palestinian 0.05130, Iraqi_Jew 0.04862, Druze 0.04071, Samaritan 0.03719, Armenian 0.03395, Greek 0.03238)
Cluster 22 [EUR II NORTH / EAST] ~ 76,94% (Estonian 0.99961, Norwegian 0.99961, Finnish 0.91760, Orcadian 0.88170, Icelandic 0.84063, [SampleName] 0.76948, Russian 0.76850]
Cluster 23 [LEV II SILK ROAD] ~ 1,59% (Yemenite_Jew 0.55388, Sindhi 0.50256, Iraqi_Jew 0.07379, Palestinian 0.04828, Iranian 0.04465, Agaw 0.03217, Kashmiri_Pandit 0.03159)
Cluster 24 ~ 0% (Igorot 0.9996, Atayal 0.9996, Dusun 0.9996, Ami 0.9996, Hawaiian 0.8833)
Cluster 25 [INDIA-KHURASAN DRIFT] ~ 0,06% (Brahui 0.54485, French 0.33782, Kashmiri_Pandit 0.08535, Balochi 0.03788, Polish 0.03274, Pathan 0.03216, Makrani 0.02605)
Cluster 26 ~ 0% (Igbo 0.9996, Esan 0.9996, Lemande 0.7168, Yoruba 0.4593, Ngumba 0.3929)
Cluster 27 ~ 0% (Surui 0.9996, Piapoco 0.1221, Chane 0.1039, Quechua 0.0408, Mayan 0.0402)
Cluster 28 ~ 0% (Mada 0.9996, Fulani 0.9996, Bulala 0.1558, Gambian 0.0714, Saharawi 0.0697)
Cluster 29 ~ 0% (Somali 0.9996, Rendille 0.9996, Iraqw 0.8833, Agaw 0.7499, Amhara 0.6955)
Cluster 30 ~ 0% (Irula 0.9996, Mala 0.9996, Kurumba 0.9451, Relli 0.7937, Yadava 0.7792)
Cluster 31 ~ 0% (Aleut 0.9996, Tlingit 0.9996, Maori 0.0519, Russian 0.0329, Cree 0.0297)
Cluster 32 ~ 0% (Mixe 0.9996, Zapotec 0.9797, Nahua 0.9496, Mayan 0.9332, Quechua 0.9185)
Cluster 33 ~ 0% (Dinka 0.9996, Mursi 0.9996, Sengwer 0.507, Bulala 0.4946, Ogiek 0.2988)
Cluster 34 [SAMARKAND DRIFT] ~ 0,09% (Onge 0.99961, Cambodian 0.03190, Khonda_Dora 0.02401, Kurumba 0.02335, Thai 0.01854, Burmese 0.01764, Kharia 0.01549)
Cluster 35 ~ 0% (BantuHerero 0.6755, Sandawe 0.666, Mende 0.4998, Hadza 0.1443, Iraqw 0.0956)
Cluster 36 [LEV III AL ANDALUS] ~ 1,94% (BedouinB 0.99961, Jordanian 0.33321, Samaritan 0.18576, Palestinian 0.13434, Agaw 0.11226, Yemenite_Jew 0.10950, Druze 0.10422)
Cluster 37 ~ 0% (Mandenka 0.9996, Gambian 0.9283, Kongo 0.8832, BantuKenya 0.7442, BantuTswana 0.704)
Cluster 38 ~ 0% (Mbuti 0.9996, Aari 0.0338, Hadza 0.03, Luo 0.023, BantuKenya 0.0207)
Cluster 39 ~ 0% (Karitiana 0.9996, Piapoco 0.0901, Chane 0.0896, Quechua 0.0404, Mayan 0.0163).
Admixture, K = 50, SGDP, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.150506 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.762205 0.000010 0.000010 0.000010 0.000010 0.069726 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.017104 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010.
Cluster 0 ~ 0% (Ju_hoan_North 0.9995, BantuTswana 0.1100, Sandawe 0.0785, BantuHerero 0.0542, Aari 0.0490, Ogiek 0.0145, Elmolo 0.0086)
Cluster 1 ~ 0% (Mursi 0.9995, Dinka 0.6663, Sengwer 0.4124, Bulala 0.3978, Ogiek 0.2640, Luo 0.2216, Luhya 0.1673)
Cluster 2 ~ 0% (Lemande 0.9995, Kongo 0.9560, Tikar_South 0.9492, BantuHerero 0.9409, Ngumba 0.9015, Esan 0.8580, Igbo 0.8538)
Cluster 3 [MAGHREB WEST] ~ 0% (Mozabite 0.5732, Saharawi 0.0855, Mixtec 0.0088, Spanish 0.0077, Druze 0.0067, Palestinian 0.0067, Bulgarian 0.0062)
Cluster 4 ~ 0% (Oroqen 0.9995, Yakut 0.9995, Even 0.9685, Ulchi 0.6772, Hezhen 0.4875, Itelman 0.4549, Altaian 0.3821)
Cluster 5 [CAUCASUS] ~ 0% (Abkhasian 0.9995, Georgian 0.9995, Adygei 0.8699, North_Ossetian 0.7660, Armenian 0.5848, Chechen 0.5144, Iranian 0.4831)
Cluster 6 ~ 0% (Onge 0.9995, Cambodian 0.0231, Khonda_Dora 0.0162, Burmese 0.0152, Kurumba 0.0131, Kharia 0.0113, Kapu 0.0093)
Cluster 7 ~ 0% (Mada 0.6056, Mende 0.5680, Bulala 0.0745, Kaba 0.0171, Laka 0.0168, Yoruba 0.0103, Saharawi 0.0055)
Cluster 8 ~ 0% (Punjabi 0.6318, Yadava 0.6108, Mala 0.3332, Kapu 0.1811, Bengali 0.1094, Kashmiri_Pandit 0.0944, Pathan 0.0907)
Cluster 9 ~ 0% (Elmolo 0.5041, Kikuyu 0.5023, Rendille 0.0426, Bulala 0.0334, Sengwer 0.0269, Luo 0.0116, BantuKenya 0.0062)
Cluster 10 ~ 0% (Kalash 0.9995, Kashmiri_Pandit 0.0405, Burusho 0.0393, Sindhi 0.0333, Brahmin 0.0289, Tajik 0.0217, Bengali 0.0192)
Cluster 11 ~ 0% (Papuan 0.5997, Australian 0.0845, Hawaiian 0.0043, Mansi 0.0037, Madiga 0.0022, Kharia 0.0022, Kapu 0.0015)
Cluster 12 ~ 0% (Pima 0.9995, Nahua 0.0528, Cree 0.0473, Mayan 0.0356, Chane 0.0233, Mixtec 0.0176, Piapoco 0.0124)
Cluster 13 ~ 0% (Biaka 0.9995, Baka 0.9995, Bedzan 0.9995, Bakola 0.9995, Ngumba 0.0974, Kongo 0.0435, Sandawe 0.0224)
Cluster 14 [EUR I WEST MED SARD-BASK] ~ 15,05% (Sardinian 0.9995, Basque 0.7421, Bergamo 0.2668, Albanian 0.2593, English 0.2070, Tuscan 0.2020, Saharawi 0.2015)
Cluster 15 ~ 0% (Sherpa 0.9995, Tibetan 0.9995, Tu 0.2782, Naxi 0.2739, Yi 0.2547, Burmese 0.1659, Mongola 0.0846)
Cluster 16 ~ 0% (Irula 0.9995, Burmese 0.0139, Burusho 0.0101, Kashmiri_Pandit 0.0101, Uygur 0.0063, Tu 0.0052, Kikuyu 0.0047)
Cluster 17 ~ 0% (Chipewyan 0.9995, Cree 0.2002, Aleut 0.0794, Tlingit 0.0588, Chechen 0.0247, Tubalar 0.0101, Bengali 0.0100)
Cluster 18 ~ 0% (Atayal 0.9995, Igorot 0.9995, Ami 0.9995, Hawaiian 0.6601, Dusun 0.5471, Maori 0.2625, Kinh 0.0967)
Cluster 19 ~ 0% (Surui 0.9995, Chane 0.0958, Piapoco 0.0533, Mayan 0.0355, Nahua 0.0078, Aleut 0.0070, Adygei 0.0060)
Cluster 20 ~ 0% (Kusunda 0.7015, Saami 0.5937, Altaian 0.0257, Burmese 0.0177, Kashmiri_Pandit 0.0152, Burusho 0.0136, Mansi 0.0134)
Cluster 21 [LEV-ARAB] ~ 0% (BedouinB 0.9995, Saharawi 0.0713, Palestinian 0.0387, Agaw 0.0228, Albanian 0.0222, Iranian 0.0208, Druze 0.0206)
Cluster 22 [EUR II BALTIC SLAWIC] ~ 0% (Crete 0.4998, Estonian 0.4998, Czech 0.0550, Polish 0.0517, Russian 0.0458, Icelandic 0.0387, Bulgarian 0.0281)
Cluster 23 ~ 0% (Piapoco 0.6101, Chane 0.0542, Mayan 0.0415, Cree 0.0108, Mixtec 0.0072, Tubalar 0.0061, Aleut 0.0051)
Cluster 24 [EUR III NORTHWEST] ~ 76,22% (Norwegian 0.9995, Finnish 0.9835, [SampleName] 0.7622, Orcadian 0.7365, Russian 0.7237, English 0.7010, Icelandic 0.6947)
Cluster 25 ~ 0% (Somali 0.9995, Masai 0.6291, Bulala 0.0348, Rendille 0.0315, Sengwer 0.0157, Ogiek 0.0130, Mozabite 0.0114)
Cluster 26 ~ 0% (Kaba 0.5735, Laka 0.5720, Bulala 0.0467, Mada 0.0343, Tikar_South 0.0277, Yoruba 0.0213, Sengwer 0.0209)
Cluster 27 ~ 0% (Korean 0.9995, Japanese 0.9995, Han 0.7358, Xibo 0.6845, Daur 0.6237, Tujia 0.6224, Mongola 0.5794)
Cluster 28 ~ 0% (Khomani_San 0.9995, BantuTswana 0.1231, Sandawe 0.0114, BantuHerero 0.0044, Sengwer 0.0043, Aari 0.0036, Elmolo 0.0030)
Cluster 29 [LEV I] ~ 6,97% (Samaritan 0.9995, Yemenite_Jew 0.9995, Jordanian 0.3332, Iraqi_Jew 0.3104, Agaw 0.2868, Druze 0.2728, Amhara 0.2465)
Cluster 30 ~ 0% (Bougainville 0.9995, Australian 0.0620, Hawaiian 0.0577, Maori 0.0569, Thai 0.0082, Uygur 0.0054, Daur 0.0038)
Cluster 31 ~ 0% (Iraqw 0.9995, Aari 0.8058, Rendille 0.7917, Agaw 0.6845, Amhara 0.6649, Ogiek 0.6497, Sandawe 0.5606)
Cluster 32 ~ 0% (Balochi 0.9995, Makrani 0.9995, Tajik 0.6135, Brahui 0.4998, Pathan 0.2659, Sindhi 0.2636, Kashmiri_Pandit 0.2286)
Cluster 33 ~ 0% (Lezgin 0.5063, Chechen 0.0166, Maori 0.0090, Sindhi 0.0081, Pathan 0.0078, Icelandic 0.0069, Adygei 0.0061)
Cluster 34 ~0% (Eskimo_Chaplin 0.9995, Eskimo_Sireniki 0.9995, Eskimo_Naukan 0.9995, Itelman 0.5446, Aleut 0.4087, Chukchi 0.3365, Tlingit 0.3211)
Cluster 35 ~ 0% (Hadza 0.4998, Dinka 0.3332, Aari 0.1094, Sengwer 0.0700, Sandawe 0.0557, Luo 0.0533, Bulala 0.0359)
Cluster 36 ~ 0% (Kurumba 0.9833, Relli 0.9027, Madiga 0.8586, Kharia 0.7569, Kapu 0.6694, Mala 0.6663, Khonda_Dora 0.6593)
Cluster 37 [HIMALAYA] ~ 0% (Hazara 0.5903, Mansi 0.5834, Tubalar 0.1225, North_Ossetian 0.0520, Altaian 0.0468, Kyrgyz 0.0273, Kashmiri_Pandit 0.0218)
Cluster 38 [LEV II EAST MED] ~ 1,71% (Turkish 0.5048, Jordanian 0.3332, Druze 0.0368, Greek 0.0320, Hungarian 0.0308, Iraqi_Jew 0.0272, Palestinian 0.0272)
Cluster 39 [SAHELIAN WEST AFRICA] ~ 0% (Fulani 0.9995, Saharawi 0.0840, Mozabite 0.0317, Bulala 0.0244, Spanish 0.0063, Kikuyu 0.0051, Sandawe 0.0040)
Cluster 40 ~ 0% (Papuan 0.3998, Maori 0.0487, Australian 0.0275, Hawaiian 0.0057, Cambodian 0.0029, Bengali 0.0028, Iranian 0.0027)
Cluster 41 ~ 0% (Quechua 0.9995, Mayan 0.3437, Chane 0.3234, Nahua 0.1586, Piapoco 0.1155, Cree 0.0959, Mixtec 0.0729)
Cluster 42 ~ 0% (Zapotec 0.9995, Mixe 0.9995, Nahua 0.7640, Mixtec 0.7560, Mayan 0.5224, Chane 0.4168, Cree 0.2283)
Cluster 43 [LEV-IRAN] ~ 0% (Brahui 0.4998, Palestinian 0.3380, Jordanian 0.3332, Druze 0.0559, Polish 0.0456, Bulgarian 0.0348, Armenian 0.0321)
Cluster 44 [EUR IV IBERIAN FRENCH] ~ 0% (Spanish 0.5663, French 0.3762, Aleut 0.3562, Tlingit 0.3380, Basque 0.2574, Icelandic 0.1396, Polish 0.1103)
Cluster 45 ~ 0% (Dai 0.9995, Lahu 0.9418, Cambodian 0.8473, Thai 0.8142, Kinh 0.6167, Miao 0.4583, Dusun 0.4511)
Cluster 46 ~ 0% (Mbuti 0.9995, Aari 0.0318, Sandawe 0.0234, Luo 0.0216, Sengwer 0.0162, BantuKenya 0.0155, Luhya 0.0146)
Cluster 47 ~ 0% (Karitiana 0.9995, Chane 0.0860, Piapoco 0.0475, Mayan 0.0208, Nahua 0.0164, Altaian 0.0100, Aleut 0.0089)
Cluster 48 ~ 0% (Australian 0.8257, Hawaiian 0.0257, Khonda_Dora 0.0247, Maori 0.0133, Chechen 0.0076, Xibo 0.0030, Cambodian 0.0025)
Cluster 49 ~ 0% (Gambian 0.9995, Mandenka 0.9995, Yoruba 0.1879, Igbo 0.1457, Esan 0.1415, Mende 0.1342, Bulala 0.0926).
Admixture, K = 64, SGDP, "SampleName" = 0.000010 0.000010 0.000010 0.000011 0.000010 0.043267 0.002267 0.000010 0.000010 0.000010 0.000010 0.002843 0.000010 0.000010 0.000010 0.000010 0.001887 0.579926 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.056870 0.000010 0.000010 0.062769 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.005709 0.000010 0.067165 0.000010 0.000010 0.002189 0.000010 0.000010 0.000010 0.000010 0.149018 0.000010 0.000010 0.025567 0.000010 0.000012 0.000010 0.000010.
Cluster 0 [LEV I MAGHREB] ~ 0% (Yemenite_Jew 0.999370, Mozabite 0.915131, Saharawi 0.773338, Fulani 0.352749, Agaw 0.252323, Amhara 0.251544, Palestinian 0.223404)
Cluster 1 ~ 0% (Chipewyan 0.9993, Cree 0.0909, Chechen 0.0219, Bengali 0.0089, Kyrgyz 0.0074; Altaian 0.0067, Russian 0.0048)
Cluster 2 ~ 0% (Eskimo_Naukan 0.9994, Eskimo_Sireniki 0.9994, Eskimo_Chaplin 0.9994, Itelman 0.5334, Chukchi 0.3182, Mansi 0.0563, Altaian 0.0235)
Cluster 3 ~ 0% (Karitiana 0.9994, Chane 0.0519, Piapoco 0.025, Altaian 0.0076, Iranian 0.0047, Uygur 0.0045, Pathan 0.004)
Cluster 4 ~ 0% (Ogiek 0.9994, Kikuyu 0.0229, Somali 0.018, Maori 0.0141, Elmolo 0.0097, Masai 0.0061, Hadza 0.0057)
Cluster 5 [URAL HU BALT] ~ 4,33% (Tajik 0.565963, Estonian 0.517672, Pathan 0.056467, Burusho 0.055600, Hungarian, 0.052090, Uygur 0.048460, Altaian 0.047667)
Cluster 6 [SLAWIC SIBIRIC] ~ 0,23% (Saami 0.999370, Mansi 0.063710, Russian 0.048402, Hazara 0.035098, Altaian 0.028638, Bulgarian 0.014867, Kyrgyz 0.010055)
Cluster 7 ~ 0% (Mixe 0.9994, Zapotec 0.0327, Mixtec 0.0236, Cree 0.0146, Chechen 0.0119, Mansi 0.0117, Mongola 0.005)
Cluster 8 ~ 0% (Esan 0.63, BantuKenya 0.4997, Yoruba 0.4606, Igbo 0.196, Kaba 0.0904, Laka 0.0249, Hadza 0.0209)
Cluster 9 ~ 0% (Even 0.9994, Yakut 0.9994, Mansi 0.2411, Altaian 0.2095, Oroqen 0.194, Kyrgyz 0.1605, Hezhen 0.1374)
Cluster 10 ~ 0% (Irula 0.9994, Mala 0.3331, Kurumba 0.1205, Khonda_Dora 0.0835, Relli 0.0510, Cambodian 0.048, Kharia 0.0444)
Cluster 11 [CAUCASUS TURK ALBORZ]~ 0,28% (Abkhasian 0.999370, Adygei 0.998652, Lezgin 0.802912, Chechen 0.586578, Iranian 0.499426, Turkish 0.481772, North_Ossetian 0.459624)
Cluster 12 ~ 0% (Dinka 0.9994, Mursi 0.4997, Bulala 0.2222, Luo 0.2033, Somali 0.1373, Kikuyu 0.1087, Mada 0.1081)
Cluster 13 ~ 0% (Bougainville 0.9994, Maori 0.0581, Hawaiian 0.0557, Thai 0.0082, Uygur 0.0047, Relli 0.0046, Burmese 0.0028)
Cluster 14 ~ 0% (Yi 0.9935, Naxi 0.984, Korean 0.8494, Tu 0.7992, Han 0.719, Tibetan 0.6998, Xibo 0.6069)
Cluster 15 ~ 0% (Balochi 0.9994, Pathan 0.0179, Makrani 0.0169, Kashmiri_Pandit 0.0121, Brahui 0.01, Iranian 0.0098, Burusho 0.0084)
Cluster 16 [SAMARKAND DRIFT] ~ 0,19% (Onge 0.999370, Kurumba 0.031693, Cambodian 0.024527, Khonda_Dora 0.023080, Kharia 0.017142, Burmese 0.016314, Kapu 0.009562)
Cluster 17 [EUR CENTRAL NORTH] ~ 57,99% (Norwegian 0.999370, Orcadian 0.999370, Finnish 0.997875, [SampleName] 0.579926, Russian 0.541702, Hungarian 0.524311, Icelandic 0.499690)
Cluster 18 ~ 0% (Sindhi 0.519, Punjabi 0.2694, Kashmiri_Pandit 0.0489, Pathan 0.0482, Burusho 0.0284, Iranian 0.0184, Uygur 0.0164)
Cluster 19 ~ 0% (Tubalar 0.9993, Altaian 0.1168, Mansi 0.094, Kashmiri_Pandit 0.0301, Mongola 0.0266, Hazara 0.0236, Russian 0.0222)
Cluster 20 ~ 0% (Papuan 0.5142, Mansi 0.0033, Iranian 0.0013, Uygur 0.0006, Burmese 0.0006, Turkish 0.0003)
Cluster 21 ~ 0% (Madiga 0.9994, Yadava 0.9261, Kapu 0.8426, Relli 0.8333, Kurumba 0.7718, Bengali 0.6871, Kharia 0.68)
Cluster 22 ~ 0% (Dusun 0.9994, Ami 0.9994, Atayal 0.9994, Hawaiian 0.5564, Maori 0.2304, She 0.1077, Han 0.0647)
Cluster 23 ~ 0% (Lemande 0.9994, Kikuyu 0.0199, Igbo 0.018, Laka 0.0138, Yoruba 0.0103, Esan 0.0084, Maori 0.0033)
Cluster 24 ~ 0% (Kongo 0.9994, Tikar_South 0.9994, Ngumba 0.9744, BantuHerero 0.9711, Luhya 0.834, BantuTswana 0.764, Luo 0.7439)
Cluster 25 ~ 0% (Japanese 0.4007, Korean 0.0158, Kurumba 0.0132, Daur 0.0128, Mongola 0.009, Tujia 0.0088, Altaian 0.0079)
Cluster 26 ~ 0% (Papuan 0.1333, Maori 0.021, Hawaiian 0.0163, Kurumba 0.0143, Cambodian 0.0069, Bengali 0.0055, Iranian 0.0037)
Cluster 27 ~ 0% (Sengwer 0.9994, Mursi 0.4997, Luhya 0.1215, Elmolo 0.0851, BantuKenya 0.0731, Kikuyu 0.0495, Hadza 0.0477)
Cluster 28 ~ 0% (Papuan 0.2665, Maori 0.0259, Cambodian 0.0028, Burmese 0.0022, Thai 0.0013, Tibetan 0.0011, Daur 0.0009)
Cluster 29 ~ 0% (Dai 0.9993, Lahu 0.8681, Cambodian 0.8297, Kinh 0.8056, Thai 0.8056, Miao 0.4219, She 0.3446)
Cluster 30 [EUR SCANDINAVIC FRENCH ACADIAN CHG] ~ 5,69% (Icelandic 0.499690, French 0.353017, [SampleName] 0.056870, Hungarian 0.035729, Bergamo 0.018949, Chechen 0.017470, Lezgin 0.016206)
Cluster 31 ~ 0% (Mende 0.9994, Gambian 0.9994, Mandenka 0.6663, Fulani 0.6466, Igbo 0.2019, Kaba 0.1727, Yoruba 0.156)
Cluster 32 [LEV II ZAGROS KHURASAN] ~ 0% (Brahui 0.5262, Druze 0.505101, Kashmiri_Pandit 0.072501, Chechen 0.037711, Iranian 0.036116, Tuscan 0.032174, Lezgin 0.027425)
Cluster 33 [EAST EUR] ~ 6,28% (Polish 0.999370, Czech 0.999370, English 0.625827, Tlingit 0.196181, Basque 0.163992, Russian 0.133703, Hungarian 0.109596)
Cluster 34 ~ 0% (Iraqw 0.9994, Aari 0.9329, Hadza 0.6764, Amhara 0.6077, Sandawe 0.5988, Somali 0.5818, Agaw 0.5679)
Cluster 35 [LEV III BABYLON] ~ 0% (Iraqi_Jew 0.551901, Makrani 0.542964, Iranian 0.048055, Albanian 0.030265, Agaw 0.027466, Palestinian 0.026236, Brahui 0.021801)
Cluster 36 ~ 0% (Laka 0.5627, Mandenka 0.3331, Kaba 0.1174, Mozabite 0.0843, Bulala 0.0328, Igbo 0.0295, Yoruba 0.0242)
Cluster 37 ~ 0% (Mayan 0.9994, Quechua 0.9994, Piapoco 0.9334, Chane 0.8674, Zapotec 0.1344, Mixtec 0.1226, Cree 0.0331)
Cluster 38 ~ 0% (Mbuti 0.9994, Hadza 0.0309, Aari 0.0202, Sandawe 0.0176, Luo 0.0064, Elmolo 0.0052)
Cluster 39 ~ 0% (Surui 0.9994, Chane 0.0802, Piapoco 0.041, Zapotec 0.0065, Mongola 0.006, Chukchi 0.0053, Bengali 0.0032)
Cluster 40 ~ 0% (Pima 0.9994, Cree 0.5805, Mixtec 0.0195, Mansi 0.014, Altaian 0.0067, Uygur 0.0063, Mongola 0.0063)
Cluster 41 ~ 0% (Kusunda 0.6607, Burmese 0.0073, Tibetan 0.0069, Kharia 0.0064, Bengali 0.0059, Altaian 0.0047, Burusho 0.0047)
Cluster 42 ~ 0% (Baka 0.9994, Bakola 0.9994, Biaka 0.3431, Hadza 0.0179, Maori 0.0082, Sandawe 0.0047)
Cluster 43 ~ 0% (Khomani_San 0.9994, Ju_hoan_North 0.9994, BantuTswana 0.2354, Sandawe 0.0889, Hadza 0.0583, Aari 0.0463, BantuHerero 0.0283)
Cluster 44 ~ 0% (Punjabi 0.5331, Kapu 0.0599, Burusho 0.0505, Kashmiri_Pandit 0.0434, Hazara 0.0377, Brahmin 0.0349, Pathan 0.0338)
Cluster 45 ~ 0% (Australian 0.3331, Papuan 0.0854, Kharia 0.0088, Khonda_Dora 0.0075, Kurumba 0.0048, Palestinian 0.0022, Tu 0.0018), Cluster 46 [LEV IV EAST MED] ~ 0,57% (Jordanian 0.716330, Crete 0.551684, North_Ossetian 0.499690, Palestinian 0.114259, Turkish 0.103512, Druze 0.086685, Armenian 0.070785)
Cluster 47 ~ 0% (Aleut 0.9994, Tlingit 0.8032, Maori 0.0419, Chukchi 0.0387, Russian 0.0375, North_Ossetian 0.0266, Cree 0.0213)
Cluster 48 [ITAL SARD BALKANS] ~ 6,72% (Tuscan 0.524066, Sardinian 0.333130, Albanian 0.082542, Bergamo 0.077957, [SampleName] 0.067165, Greek 0.053757, Crete 0.035535)
Cluster 49 ~ 0% (Masai 0.6002, Elmolo 0.012, Kikuyu 0.0093, Bulala 0.0053, Rendille 0.0042, Brahui 0.0037, Makrani 0.003)
Cluster 50 ~ 0% (Mada 0.5959, Bulala 0.557, Kaba 0.0331, Elmolo 0.0209, Laka 0.0152, Palestinian 0.0067, Masai 0.0062)
Cluster 51 [LEV V NATUFIAN] ~ 0,22% (BedouinB 0.999360, Palestinian 0.065540, Agaw 0.038766, Albanian 0.028428, Iranian 0.025727, Saharawi 0.025255, Druze 0.023979)
Cluster 52 ~ 0% (Kalash 0.9994, Burusho 0.041, Kashmiri_Pandit 0.0403, Brahmin 0.0274, Hazara 0.0232, Pathan 0.0204, Sindhi 0.0192)
Cluster 53 ~ 0% (Ulchi 0.9994, Oroqen 0.8054, Itelman 0.4659, Hezhen 0.4195, Mongola 0.198, Xibo 0.1879, Kyrgyz 0.1554)
Cluster 54 ~ 0% (Bedzan 0.9994, Biaka 0.6563, Ngumba 0.025, Hadza 0.01, Kikuyu 0.0077, Brahui 0.0036, Laka 0.0032)
Cluster 55 ~ 0% (Daur 0.5602, Tujia 0.5091, Xibo 0.1104, Mongola 0.0726, Korean 0.0384, Kyrgyz 0.0241, Uygur 0.0169)
Cluster 56 [WEST MED] ~ 14,9% (Basque 0.835388, Spanish 0.674786, Sardinian 0.666250, Bergamo 0.226393, Albanian 0.183993, Hungarian 0.149619, [SampleName] 0.149018)
Cluster 57 ~ 0% (Rendille 0.5182, Somali 0.0396, Elmolo 0.0238, Agaw 0.0221, Amhara 0.0161, Masai 0.0091, Kikuyu 0.008)
Cluster 58 ~ 0% (Australian 0.6662, Khonda_Dora 0.0218, Hawaiian 0.02, Maori 0.0134, Chechen 0.0072, Kurumba 0.0072, Tibetan 0.0036)
Cluster 59 [LEV VI YEHUD] ~ 2,56% (Samaritan 0.999370, Bulgarian 0.514188, [SampleName] 0.025567, Agaw 0.024886, Druze 0.024710, Tuscan 0.024566, Albanian 0.022868)
Cluster 60 ~ 0% (Igorot 0.9994, Hawaiian 0.1318, Maori 0.0465, Miao 0.028, Han 0.0119, Xibo 0.0093, Kapu 0.0086)
Cluster 61 [CAUCASUS KURA-ARAXES] ~ 0% (Georgian 0.561557, Armenian 0.519848, Yadava 0.053261, Greek 0.047141, Bergamo 0.043179, Iranian 0.034355, Turkish 0.033146)
Cluster 62 (Sherpa 0.9994, Tibetan 0.2296, Tu 0.0671, Burmese 0.0355, Burusho 0.0247, Hawaiian 0.0194, Kyrgyz 0.0161)
Cluster 63 ~ 0% (Nahua 0.9994, Zapotec 0.8258, Mixtec 0.7042, Cree 0.0594, Tajik 0.0122, Burusho 0.0117, Uygur 0.0072).
II. Without Geno, but with Maf and LD Pruning
Admixture, K = 64, SGDP, plink1.9 --bfile merged2 --maf 0.05 --make-bed --out filtered_maf, plink1.9 --bfile filtered_maf --indep-pairwise 50 10 0.2 --out pruned, plink1.9 --bfile filtered_maf --extract pruned.prune.in --make-bed --out final_dataset, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.057240 0.032003 0.000010 0.000010 0.000010 0.000010 0.022104 0.000010 0.000010 0.000010 0.000010 0.000010 0.260186 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.068223 0.000010 0.000010 0.345856 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.088758 0.000010 0.001950 0.000010 0.000010 0.000010 0.000010 0.000010 0.123130 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010.
Cluster 5 [URAL BALT ASI] ~ 5,72% (Tajik 0.618254, Sindhi 0.558323, Estonian 0.499690, Pathan 0.166757, Kashmiri_Pandit 0.148846, Burusho 0.138270, Brahmin 0.130699)
Cluster 6 [SLAWIC SIBIRC] ~ 3,2% (Saami 0.999370, Mansi 0.083032, Finnish 0.036462, [SampleName] 0.032003, Hazara 0.028312, Russian 0.026698, Chukchi 0.023810)
Cluster 17 [EUR NORTH WEST] ~ 26,02% (Norwegian 0.999370, Orcadian 0.999368, English 0.499690, Icelandic 0.499690, Polish 0.302514, [SampleNmme] 0.260186, Cree 0.202508)
Cluster 30 [EUR SCANDINAVIC FRENCH ACADIAN CHG] ~ 6,82% (Icelandic 0.499690, French 0.350846, [SampleName] 0.068223, Basque 0.033642, Bergamo 0.028219, Lezgin 0.025851, Hungarian 0.025455)
Cluster 33 [EAST EUR] ~ 34,59% (Czech 0.999370, Russian 0.765192, Hungarian 0.721305, Tlingit 0.538549, English 0.499690, Estonian 0.499690, Polish 0.477838)
Cluster 48 [ITAL SARD BALKANS]~ 8,88% (Tuscan 0.548593, Sardinian 0.491392, Bergamo 0.122373, Albanian 0.119521, [SampleName] 0.088758, Greek 0.073334, Turkish 0.054585)
Cluster 50 [LEV] ~ 0,2% (Jordanian 0.335559, Armenian 0.013222, Palestinian 0.009640, Iranian 0.009224, Druze 0.008561, Iraqi_Jew 0.008490, Turkish 0.008254)
Cluster 56 [WEST MED PAL]~ 12,31% (Basque 0.679319, Spanish 0.596367, Palestinian 0.432348, Sardinian 0.155452, Greek 0.127565, [SampleName] 0.123130, Albanian 0.115227).
III. With Geno, Maf and LD Pruning
Admixture, K = 2-15, 20, 30, 40, 50, 57-66, 68, 72, 80, Simons Genome Diversity Project = SGDP, plink1.9 --bfile merged2 -- geno 0.05 --maf 0.05 --make-bed --out filtered_maf, plink1.9 --bfile filtered_maf --indep-pairwise 50 10 0.2 --out pruned, plink1.9 --bfile filtered_maf --extract pruned.prune.in --make-bed --out final_dataset.
[ A ] AMD : AFR - 75 : 25
K = 2, "SampleName" = 0.235205 0.764795, CV error (K=2) 0.59424, Loglikelihood: -49045736.668625, Fst divergences between estimated populations: Pop1-Pop0 0.134.
=== Cluster 0 === 23,5% AFR
Khomani_San 0.999990, BantuTswana 0.999990, Ju_hoan_North 0.999990, Yoruba 0.999990, Kongo 0.999990, Lemande 0.999990, Esan 0.999990
=== Cluster 1 === 76,5% AMD
Zapotec 0.999990, Han 0.999990, Chane 0.999990, Chipewyan 0.999990, Quechua 0.999990, Eskimo_Naukan 0.999990, Eskimo_Sireniki 0.999990
[ B ] EUR 90+ : AMD Drift
K = 3, "SampleName" = 0.008898 0.000010 0.991092, CV error (K=3) 0.57642, Loglikelihood: -48022713.984481, Fst divergences between estimated populations: Pop1-Pop0 0.139, Pop2-Pop0 0.081, Pop2-Pop1 0.125.
=== Cluster 0 === 0,89% AMD
Mixe 0.999980, Karitiana 0.999980, Surui 0.999980, Eskimo_Chaplin 0.999980, Miao 0.999980, Hezhen 0.999980, Igorot 0.999980
=== Cluster 1 === AFR
Khomani_San 0.999980, Mbuti 0.999980, Biaka 0.999980, BantuTswana 0.999980, Lemande 0.999980, Bakola 0.999980, Baka 0.999980
=== Cluster 2 === 99,11% EUR
Albanian 0.999980, Basque 0.999980, Bergamo 0.999980, Sardinian 0.998426, English 0.996291, Tuscan 0.996150, Greek 0.994109
K = 4, "SampleName" = 0.985796 0.000010 0.000010 0.014184, CV error (K=4) 0.56658, Loglikelihood: -47330314.319648.
=== Cluster 0 === 98,58% EUR
Basque 0.999970, Albanian 0.999652, Sardinian 0.998369, Bergamo 0.997304, Tuscan 0.993943, English 0.993313, Greek 0.992884
=== Cluster 1 === AFR
Khomani_San 0.999970, Lemande 0.999970, Esan 0.999970, Biaka 0.999970, Bedzan 0.999970, BantuTswana 0.999970, Tikar_South 0.999970
=== Cluster 2 === OCR-AUS
Papuan 0.999970, Australian 0.846618, Bougainville 0.731240, Onge 0.277394, Hawaiian 0.234150, Khonda_Dora 0.213286, Kurumba 0.207622
=== Cluster 3 === 1,42% AMD
Surui 0.999970, Mayan 0.999970, Nahua 0.999970, Piapoco 0.999970, Pima 0.999970, Chane 0.999970, Karitiana 0.999970
K = 5, first run, "SampleName" = 0.000010 0.965348 0.000010 0.000010 0.034622, CV error (K=5) 0.56007, Converged in 22 iterations (142.017 sec), Loglikelihood: -46811291.328097.
K = 5, second run, "SampleName" = 0.000010 0.965348 0.000010 0.000010 0.034622, CV error (K=5) 0.56007, Converged in 22 iterations (142.607 sec), Loglikelihood: -46811291.328097.
=== Cluster 0 === AFR
Khomani_San 0.999960, Lemande 0.999960, Bedzan 0.999960, Bakola 0.999960, Baka 0.999960, Mbuti 0.999960, Esan 0.999960
=== Cluster 1 === 96,53% EUR
Sardinian 0.997704, Basque 0.989665, Albanian 0.987953, Greek 0.985435, Tuscan 0.984699, Bergamo 0.984581, English 0.975317
=== Cluster 2 === OCR-AUS
Papuan 0.999960, Australian 0.808563, Bougainville 0.668171, Onge 0.176079, Kurumba 0.132275, Mala 0.113220, Khonda_Dora 0.108099
=== Cluster 3 === EAS
Atayal 0.999960, Igorot 0.999960, Ami 0.999960, She 0.999960, Tujia 0.998859, Miao 0.998618, Dai 0.997722
=== Cluster 4 === 3,46% AMD
Mixe 0.999960, Mayan 0.999960, Surui 0.999960, Chane 0.999960, Nahua 0.999960, Piapoco 0.999960, Pima 0.999960
K = 6, "SampleName" = 0.000010 0.965363 0.000010 0.034597 0.000010 0.000010, CV error (K=6) 0.56195, Loglikelihood: -46598419.952126.
=== Cluster 0 === OCR-AUS
Papuan 0.999949, Australian 0.808315, Bougainville 0.667932, Onge 0.176089, Kurumba 0.132130, Mala 0.113038, Khonda_Dora 0.107969
=== Cluster 1 === 96,54% EUR
Sardinian 0.996123, Basque 0.989510, Albanian 0.987767, Greek 0.984154, Bergamo 0.984140, Tuscan 0.982829, English 0.975357
=== Cluster 2 === EAS
Ami 0.999950, Igorot 0.999950, She 0.999950, Atayal 0.999950, Tujia 0.998856, Miao 0.998598, Dai 0.997709
=== Cluster 3 === 3,45% AMD
Surui 0.999950, Mixe 0.999950, Chane 0.999950, Nahua 0.999950, Piapoco 0.999950, Pima 0.999950, Karitiana 0.999950
=== Cluster 4 === S-AFR
Khomani_San 0.999950, Ju_hoan_North 0.999950, Mbuti 0.614828, Bakola 0.424548, Biaka 0.419268, Baka 0.395563, Bedzan 0.375159
=== Cluster 5 === W-AFR
Mada 0.993051, Yoruba 0.981544, Laka 0.974293, Kaba 0.973777, Dinka 0.970675, Mandenka 0.969086, Esan 0.965114
K = 7, "SampleName" = 0.000010 0.000010 0.045330 0.950414 0.000010 0.000010 0.004216, CV error (K=7) 0.56147, Loglikelihood: -46398579.788798.
=== Cluster 0 === IND
Mala 0.981600, Irula 0.979910, Madiga 0.957664, Kurumba 0.897681, Yadava 0.881297, Relli 0.879737, Kapu 0.859306
=== Cluster 1 === S-AFR
Khomani_San 0.999940, Ju_hoan_North 0.999940, Mbuti 0.614390, Bakola 0.424167, Biaka 0.418862, Baka 0.395020, Bedzan 0.374674,
=== Cluster 2 === 4,53% AMD
Chane 0.999940, Karitiana 0.999940, Mayan 0.999940, Nahua 0.999940, Piapoco 0.999940, Pima 0.999940, Mixe 0.999937
=== Cluster 3 === 95,04% EUR
Sardinian 0.991143, Basque 0.976241, Bergamo 0.964596, Albanian 0.957067, Spanish 0.954795, English 0.952175, French 0.950548
=== Cluster 4 === EAR
Ami 0.999940, She 0.999940, Atayal 0.999940, Igorot 0.999939, Tujia 0.998278, Miao 0.998277, Han 0.997322,
=== Cluster 5 === W-AFR
Mada 0.992728, Yoruba 0.981872, Laka 0.974584, Kaba 0.974154, Dinka 0.969209, Mandenka 0.968827, Esan 0.965301
=== Cluster 6 === 0,42% OCR-AUS
Papuan 0.999940, Australian 0.782684, Bougainville 0.652197, Onge 0.107634, Maori 0.105011, Hawaiian 0.069451, Kurumba 0.039136
K = 8, "SampleName" = 0.006642 0.947344 0.000010 0.043116 0.000010 0.002858 0.000010 0.000010, CV error (K=8) 0.56230, Loglikelihood: -46266546.295239.
=== Cluster 0 === 0,66% OCR-AUS
Papuan 0.999930, Australian 0.782258, Bougainville 0.651999, Onge 0.106120, Maori 0.105661, Hawaiian 0.069624, Kurumba 0.037628
=== Cluster 1 === 94,73% EUR
Basque 0.970897, Sardinian 0.966388, English 0.949912, Bergamo 0.949615, French 0.947558, [SampleName] 0.947344, Albanian 0.944218
=== Cluster 2 === KUSH
Aari 0.790647, Somali 0.782610, Rendille 0.735291, Ogiek 0.718220, Sengwer 0.716181, Iraqw 0.689611, Masai 0.670395
=== Cluster 3 === 4,31% AMD
Chane 0.999930, Karitiana 0.999930, Mayan 0.999930, Mixe 0.999930, Nahua 0.999930, Surui 0.999930, Pima 0.999930
=== Cluster 4 === S-AFR
Ju_hoan_North 0.999929, Khomani_San 0.999928, Mbuti 0.580890, Bakola 0.381599, Biaka 0.374569, Baka 0.352682, Bedzan 0.332162
=== Cluster 5 ===0,29% W-AFR
Yoruba 0.999930, Esan 0.993006, Igbo 0.988530, Lemande 0.978418, Mende 0.974087, Tikar_South 0.963879, Kongo 0.957702
=== Cluster 6 === IND
Mala 0.981232, Irula 0.980452, Madiga 0.958426, Kurumba 0.901172, Relli 0.879357, Yadava 0.879059, Kapu 0.858900
=== Cluster 7 === EAS
Ami 0.999930, Atayal 0.999930, She 0.999930, Igorot 0.999930, Tujia 0.998320, Miao 0.998296, Han 0.997363
K = 9, "SampleName" = 0.000010 0.940044 0.000010 0.000010 0.029516 0.026180 0.000571 0.000010 0.003649, CV error (K=9) 0.56312, Loglikelihood: -46111812.267651.
=== Cluster 0 === EAS
Igorot 0.999920, Ami 0.999920, Atayal 0.999920, Dai 0.995183, Dusun 0.982737, Kinh 0.956538, Lahu 0.934986
=== Cluster 1 === 94,0% EUR
Sardinian 0.967960, Basque 0.964819, Bergamo 0.947324, English 0.944717, Albanian 0.944671, French 0.943752, [SampleName] 0.940044
=== Cluster 2 === S-AFR
Khomani_San 0.999920, Ju_hoan_North 0.999915, Mbuti 0.580935, Bakola 0.381711, Biaka 0.374704, Baka 0.352793, Bedzan 0.332310
=== Cluster 3 === IND
Irula 0.982957, Mala 0.982241, Madiga 0.959805, Kurumba 0.900663, Yadava 0.883359, Relli 0.879606, Kapu 0.859840
=== Cluster 4 ===2,95% ARCTIC
Itelman 0.964278, Eskimo_Chaplin 0.796410, Eskimo_Sireniki 0.781683, Eskimo_Naukan 0.765002, Even 0.704717, Oroqen 0.641952, Ulchi 0.627312
=== Cluster 5 === 2,62% AMD
Mixe 0.999920, Chane 0.999920, Surui 0.999920, Piapoco 0.999919, Karitiana 0.999919, Mayan 0.998320, Nahua 0.993941
=== Cluster 6 === 0,06% W-AFR
Yoruba 0.999920, Esan 0.992795, Igbo 0.988109, Lemande 0.977962, Mende 0.973792, Tikar_South 0.962590, Kongo 0.957301
=== Cluster 7 === KUSH
Aari 0.793036, Somali 0.781569, Rendille 0.740806, Sengwer 0.730399, Ogiek 0.726229, Iraqw 0.694067, Masai 0.676851
=== Cluster 8 === 0,36% OCR-AUS
Papuan 0.999917, Australian 0.781975, Bougainville 0.651499, Onge 0.105769, Maori 0.102694, Hawaiian 0.065282, Kurumba 0.038875
K = 10, "SampleName" = 0.026805 0.000010 0.004929 0.000010 0.003774 0.024455 0.000600 0.000010 0.939398 0.000010, CV error (K=10) 0.57152, Loglikelihood: -46005747.323818.
=== Cluster 0 === 2,69% ARCTIC
Itelman 0.942651, Eskimo_Chaplin 0.767681, Eskimo_Sireniki 0.752358, Eskimo_Naukan 0.733450, Even 0.730614, Oroqen 0.666087, Ulchi 0.649906
=== Cluster 1 === EAS
Ami 0.999910, Igorot 0.999910, Atayal 0.999910, Dai 0.995108, Dusun 0.982617, Kinh 0.951950, Lahu 0.930168
=== Cluster 2 === 0,49% AMD I
Karitiana 0.999905, Surui 0.275130, Piapoco 0.137140, Chane 0.119668, Quechua 0.076462, Mayan 0.057106, Czech 0.020396
=== Cluster 3 === IND
Irula 0.982721, Mala 0.982223, Madiga 0.958936, Kurumba 0.900268, Yadava 0.882236, Relli 0.879407, Kapu 0.859518
=== Cluster 4 === 0,38% OCR-AUS
Papuan 0.999908, Australian 0.781944, Bougainville 0.651455, Onge 0.105730, Maori 0.102608, Hawaiian 0.065114, Kurumba 0.038874
=== Cluster 5 === 2,45% AMD II
Pima 0.999910, Mixe 0.998622, Zapotec 0.997751, Nahua 0.984281, Mayan 0.942813, Quechua 0.910995, Chane 0.880252
=== Cluster 6 === 0,06% W-AFR
Yoruba 0.999910, Esan 0.992790, Igbo 0.988123, Lemande 0.977961, Mende 0.973804, Tikar_South 0.962578, Kongo 0.957300
=== Cluster 7 === KUSH
Aari 0.792822, Somali 0.781469, Rendille 0.740770, Sengwer 0.729702, Ogiek 0.726087, Iraqw 0.694067, Masai 0.676724
=== Cluster 8 === 93,94% EUR
Sardinian 0.967428, Basque 0.964341, Bergamo 0.946536, English 0.944195, Albanian 0.943459, French 0.943250, [SampleNAme] 0.939398
=== Cluster 9 === S-AFR
Ju_hoan_North 0.999910, Khomani_San 0.999910, Mbuti 0.580927, Bakola 0.381701, Biaka 0.374697, Baka 0.352781, Bedzan 0.332299
[ C ] EUR : LEV, 85 : 15 [ + AMD ↑]
K = 11, first run, "SampleName" = 0.000010 0.000010 0.000010 0.843807 0.000010 0.000010 0.000010 0.000010 0.156103 0.000010 0.000010, CV error (K=11) 0.56995, Converged in 45 iterations (797.262 sec), Loglikelihood: -45878936.367422.
K = 11, second run, "SampleName" = 0.000010 0.000010 0.000010 0.843807 0.000010 0.000010 0.000010 0.000010 0.156103 0.000010 0.000010, CV error (K=11) 0.56995, Converged in 45 iterations (808.718 sec), Loglikelihood: -45878936.367422.
=== Cluster 0 === EAS
Ami 0.999900, Atayal 0.999900, Igorot 0.999896, Dusun 0.997826, Hawaiian 0.922203, Dai 0.879797, Kinh 0.826538,
=== Cluster 1 === S-AFR
Yoruba 0.999900, Esan 0.990684, Igbo 0.981292, Mende 0.970395, Lemande 0.970381, Mandenka 0.953793, Kongo 0.953224
=== Cluster 2 === IND
Mala 0.979027, Irula 0.968565, Madiga 0.939990, Kurumba 0.893519, Yadava 0.871290, Relli 0.870666, Kapu 0.852494
=== Cluster 3 === 84,38% EUR
Estonian 0.982426, Finnish 0.943739, Norwegian 0.938625, Icelandic 0.904758, Russian 0.863587, Orcadian 0.854886, [SampleName] 0.843807
=== Cluster 4 === S-AFR
Ju_hoan_North 0.999900, Khomani_San 0.999899, Mbuti 0.582197, Bakola 0.383307, Biaka 0.375807, Baka 0.354086, Bedzan 0.334016
=== Cluster 5 === OCR-AUS
Papuan 0.999899, Australian 0.781448, Bougainville 0.650792, Onge 0.104591, Maori 0.098551, Hawaiian 0.064923, Kurumba 0.039492
=== Cluster 6 === KUSH
Mursi 0.948846, Sengwer 0.867803, Ogiek 0.788630, Dinka 0.770264, Aari 0.734212, Masai 0.727983, Rendille 0.697458
=== Cluster 7 === AMD
Chane 0.999900, Piapoco 0.999900, Surui 0.999900, Mixe 0.999900, Karitiana 0.999899, Mayan 0.988122, Quechua 0.971409
=== Cluster 8 === 15,61% LEV
Samaritan 0.967693, BedouinB 0.944439, Yemenite_Jew 0.922666, Iraqi_Jew 0.734819, Druze 0.726546, Jordanian 0.725336, Palestinian 0.710683
=== Cluster 9 === SIBIRIC
Oroqen 0.951461, Ulchi 0.918459, Yakut 0.875723, Even 0.870412, Hezhen 0.768134, Daur 0.675602, Xibo 0.608899
=== Cluster 10 === ARCTIC
Eskimo_Sireniki 0.999900, Eskimo_Chaplin 0.999900, Eskimo_Naukan 0.999899, Itelman 0.594661, Chipewyan 0.512744, Aleut 0.460066, Chukchi 0.376477
K = 12, "SampleName" = 0.839588 0.000010 0.000010 0.000010 0.000010 0.000010 0.006237 0.000010 0.154085 0.000010 0.000010 0.000010, CV error (K=12) 0.58217, Loglikelihood: -45758600.171668.
=== Cluster 0 === 83,96% EUR
Estonian 0.975704, Finnish 0.940270, Norwegian 0.930796, Icelandic 0.899962, Russian 0.861954, Orcadian 0.853981, English 0.840089
=== Cluster 1 === IND
Madiga 0.944537, Mala 0.942258, Irula 0.940954, Yadava 0.884517, Relli 0.862806, Kapu 0.849615, Kurumba 0.841331
=== Cluster 2 === SIBIRIC
Oroqen 0.956994, Ulchi 0.923210, Yakut 0.879990, Even 0.875945, Hezhen 0.769703, Daur 0.675925, Xibo 0.606123
=== Cluster 3 === OCR-AUS
Papuan 0.999885, Australian 0.769534, Bougainville 0.644675, Maori 0.099145, Hawaiian 0.064195, Kurumba 0.037797, Khonda_Dora 0.028548
=== Cluster 4 === KUSH
Mursi 0.955741, Sengwer 0.871223, Ogiek 0.787608, Dinka 0.776643, Aari 0.732483, Masai 0.728004, Rendille 0.695012
=== Cluster 5 === AMD
Karitiana 0.999890, Mixe 0.999890, Chane 0.999890, Surui 0.999890, Piapoco 0.999888, Mayan 0.988020, Quechua 0.971387
=== Cluster 6 === 0,62% EAS-OCR
Onge 0.999890, Australian 0.201479, Bougainville 0.062691, Kurumba 0.059854, Khonda_Dora 0.049659, Kharia 0.048994, Cambodian 0.040642
=== Cluster 7 === EAS-PCF
Ami 0.999890, Igorot 0.999890, Atayal 0.999890, Dusun 0.996858, Hawaiian 0.918249, Dai 0.880817, Kinh 0.827322
=== Cluster 8 === 15,41% LEV
Samaritan 0.962268, BedouinB 0.949997, Yemenite_Jew 0.921359, Iraqi_Jew 0.721189, Druze 0.718055, Jordanian 0.716703, Palestinian 0.702092
=== Cluster 9 === S-AFR
Ju_hoan_North 0.999890, Khomani_San 0.999888, Mbuti 0.582247, Bakola 0.383352, Biaka 0.375862, Baka 0.354131, Bedzan 0.334085
=== Cluster 10 === W-AFR
Yoruba 0.999890, Esan 0.990639, Igbo 0.981030, Mende 0.970345, Lemande 0.970036, Mandenka 0.954036, Kongo 0.953076
=== Cluster 11 === ARCTIC
Eskimo_Naukan 0.999890, Eskimo_Chaplin 0.999890, Eskimo_Sireniki 0.999888, Itelman 0.592833, Chipewyan 0.512887, Aleut 0.460336, Chukchi 0.375768
K = 13, "SampleName" = 0.000010 0.000010 0.000010 0.851850 0.000010 0.000481 0.000010 0.142342 0.000010 0.000010 0.005237 0.000010 0.000010, CV error (K=13) 0.59421, Converged in 41 iterations (964.596 sec), Loglikelihood: -45646488.648116.
=== Cluster 3 === 85,29%
Estonian 0.979461, Norwegian 0.946737, Finnish 0.938499, Icelandic 0.916759, Russian 0.868483, Orcadian 0.866726, English 0.854310
=== Cluster 5 === 0,05%
Karitiana 0.999880, Surui 0.275721, Piapoco 0.137360, Chane 0.119737, Quechua 0.076570, Mayan 0.057304, Altaian 0.018421
=== Cluster 7 === 14,23%
Samaritan 0.962107, BedouinB 0.948759, Yemenite_Jew 0.921401, Iraqi_Jew 0.717913, Druze 0.713747, Jordanian 0.711645, Palestinian 0.699317
=== Cluster 10 === 0,52%
Onge 0.999880, Australian 0.201703, Bougainville 0.063562, Kurumba 0.060575, Khonda_Dora 0.051015, Kharia 0.049504, Cambodian 0.042312
K = 14, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.154908 0.843124 0.000778 0.000010 0.000010 0.000010 0.001091 0.000010 0.000010, CV error (K=14) 0.59330, Converged in 48 iterations (1266.33 sec), Loglikelihood: -45534391.476821.
=== Cluster 5 === 15,49%
Samaritan 0.965162, BedouinB 0.943659, Yemenite_Jew 0.921835, Iraqi_Jew 0.730297, Jordanian 0.722667, Druze 0.722514, Palestinian 0.707778
=== Cluster 6 === 84,31%
Estonian 0.979163, Finnish 0.942060, Norwegian 0.937089, Icelandic 0.903099, Russian 0.862690, Orcadian 0.855324, [SampleName] 0.843124 === Cluster 7 === 0,08%
Australian 0.872736, Bougainville 0.327690, Onge 0.089958, Hawaiian 0.045443, Khonda_Dora 0.037792, Maori 0.031399, Kurumba 0.024811
=== Cluster 11 === 0,11%
Karitiana 0.999870, Surui 0.265423, Piapoco 0.130865, Chane 0.116525, Quechua 0.071422, Mayan 0.050639, Altaian 0.021328
[ D ] EUR 90+ : AMD Drift
K = 15, first run, "SampleName" = 0.015544 0.000010 0.002016 0.000010 0.000010 0.000010 0.927909 0.000010 0.000010 0.005116 0.000010 0.000010 0.006169 0.012571 0.030595, CV error (K=15) 0.61894, Converged in 63 iterations (1825.01 sec), Loglikelihood: -45432888.022567.
K = 15, second run, "SampleName" = 0.015544 0.000010 0.002016 0.000010 0.000010 0.000010 0.927909 0.000010 0.000010 0.005116 0.000010 0.000010 0.006169 0.012571 0.030595, CV error (K=15) 0.61894, Converged in 63 iterations (1839.46 sec), Loglikelihood: -45432888.022567.
== Cluster 0 === 1,55%
Mixe 0.999860, Pima 0.999858, Zapotec 0.986741, Nahua 0.971136, Mayan 0.884596, Quechua 0.849364, Mixtec 0.848445
=== Cluster 1 ===
Yoruba 0.999860, Esan 0.992155, Igbo 0.984147, Mandenka 0.981404, Lemande 0.964746, Mende 0.964135, Tikar_South 0.953567
=== Cluster 2 === 0,2%
Kusunda 0.999860, Sherpa 0.125422, Tibetan 0.106032, Naxi 0.062878, Tu 0.055523, Yi 0.041167, Kharia 0.040292
=== Cluster 3 ===
Madiga 0.949318, Mala 0.943563, Irula 0.941496, Yadava 0.897533, Relli 0.865102, Kapu 0.858751, Kurumba 0.832899
=== Cluster 4 ===
Somali 0.779225, Aari 0.770456, Rendille 0.730403, Ogiek 0.717967, Sengwer 0.714724, Iraqw 0.686854, Masai 0.665947
=== Cluster 5 ===
Oroqen 0.991731, Ulchi 0.978679, Yakut 0.927453, Even 0.921003, Hezhen 0.773626, Daur 0.672122, Altaian 0.591595
=== Cluster 6 === 92,79%
Sardinian 0.957176, Basque 0.953996, Bergamo 0.934046, Albanian 0.932338, English 0.932106, French 0.929568, [SampleName] 0.927909
=== Cluster 7 ===
Mbuti 0.999860, Bakola 0.395401, Biaka 0.389676, Baka 0.372506, Bedzan 0.344552, Ngumba 0.083970, Hadza 0.070067
=== Cluster 8 ===
Ju_hoan_North 0.999860, Khomani_San 0.999859, BantuTswana 0.249016, Bakola 0.141854, Biaka 0.137450, Sandawe 0.130445, Baka 0.126795
=== Cluster 9 === 0,51%
Australian 0.871095, Bougainville 0.324495, Hawaiian 0.044439, Khonda_Dora 0.034212, Maori 0.032745, Kurumba 0.020850, Irula 0.015969
=== Cluster 10 ===
Papuan 0.999859, Bougainville 0.425054, Australian 0.128769, Maori 0.077211, Hawaiian 0.032718, Kurumba 0.024036, Kharia 0.019474
=== Cluster 11 ===
Igorot 0.999860, Ami 0.999860, Atayal 0.999860, Dusun 0.991802, Hawaiian 0.912010, Dai 0.901655, Kinh 0.844411
=== Cluster 12 === 0,62%
Karitiana 0.999860, Surui 0.999858, Piapoco 0.254371, Chane 0.231877, Quechua 0.142994, Mayan 0.115274, Nahua 0.028726
=== Cluster 13 === 1,26%
Onge 0.999858, Kurumba 0.052774, Kharia 0.045675, Khonda_Dora 0.043723, Cambodian 0.037415, Mala 0.035234, Kapu 0.030206
=== Cluster 14 === 3,06%
Eskimo_Sireniki 0.999860, Eskimo_Chaplin 0.999860, Eskimo_Naukan 0.999860, Itelman 0.572698, Aleut 0.478932, Chipewyan 0.469718, Chukchi 0.396693
[ E ] EUR : LEV : AMD, 85- : 15: <1
K = 20, "SampleName" = 0.000010 0.000010 0.000010 0.834176 0.000010 0.160086 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.002283 0.000010 0.003295 0.000010 0.000010 0.000010, CV error (K=20) 0.64453, Loglikelihood: -44939778.449651.
=== Cluster 0 ===
Iraqw 0.999810, Aari 0.925182, Hadza 0.699356, Ogiek 0.667567, Masai 0.644004, Elmolo 0.612291, Somali 0.604902
=== Cluster 1 ===
Kalash 0.999810, Makrani 0.802515, Balochi 0.750853, Brahui 0.615216, Tajik 0.563605, Abkhasian 0.503730, Iranian 0.491473
=== Cluster 2 ===
Mixe 0.999810, Pima 0.999809, Zapotec 0.986702, Nahua 0.971529, Mayan 0.884548, Quechua 0.849953, Mixtec 0.847998
=== Cluster 3 === 83,42%
Estonian 0.968139, Finnish 0.934024, Norwegian 0.910836, Icelandic 0.870329, [SampleName] 0.834176, Orcadian 0.832945, Russian 0.828414
=== Cluster 4 ===
Australian 0.870653, Bougainville 0.323744, Hawaiian 0.054799, Maori 0.033228, Khonda_Dora 0.022622, Thai 0.006685, Kurumba 0.004923
=== Cluster 5 === 16,01%
BedouinB 0.992265, Samaritan 0.799168, Yemenite_Jew 0.758121, Saharawi 0.675385, Jordanian 0.621443, Druze 0.620696, Palestinian 0.620338
=== Cluster 6 ===
Papuan 0.999810, Bougainville 0.423250, Australian 0.129164, Maori 0.074559, Hawaiian 0.026708, Kurumba 0.013378, Cambodian 0.011801
=== Cluster 7 ===
Bakola 0.999810, Baka 0.999810, Bedzan 0.999810, Biaka 0.999810, Ngumba 0.182432, Kongo 0.133105, BantuHerero 0.110659,
=== Cluster 8 ===
Mandenka 0.995687, Yoruba 0.994914, Esan 0.979447, Igbo 0.963318, Gambian 0.955994, Mende 0.955284, Lemande 0.882219
=== Cluster 9 ===
Irula 0.999810, Mala 0.999810, Madiga 0.979115, Kurumba 0.931502, Relli 0.852299, Yadava 0.813674, Kapu 0.804416
=== Cluster 10 ===
Sherpa 0.999810, Tibetan 0.995059, Naxi 0.789625, Yi 0.768353, Tu 0.633799, Korean 0.606733, Tujia 0.601800
=== Cluster 11 ===
Eskimo_Sireniki 0.999810, Eskimo_Naukan 0.999810, Eskimo_Chaplin 0.999810, Itelman 0.533071, Chipewyan 0.466060, Aleut 0.451269, Chukchi 0.356385
=== Cluster 12 ===
Dinka 0.999810, Bulala 0.746885, Mursi 0.724784, Sengwer 0.519805, Mada 0.394368, Ogiek 0.284437, Masai 0.250838
=== Cluster 13 ===
Igorot 0.999810, Dusun 0.999810, Ami 0.999810, Atayal 0.999810, Hawaiian 0.918323, Dai 0.593380, Kinh 0.566777
=== Cluster 14 === 0,23%
Surui 0.999810, Karitiana 0.999810, Piapoco 0.254395, Chane 0.231722, Quechua 0.142306, Mayan 0.115272, Nahua 0.028291
=== Cluster 15 ===
Ulchi 0.999810, Oroqen 0.999810, Yakut 0.998376, Even 0.957112, Hezhen 0.604379, Daur 0.474547, Altaian 0.469010,
=== Cluster 16 === 0,33%
Onge 0.999810, Cambodian 0.030080, Thai 0.021470, Kharia 0.020739, Kurumba 0.020504, Khonda_Dora 0.019616, Burmese 0.015062
=== Cluster 17 ===
Kusunda 0.999810, Kharia 0.026049, Bengali 0.016167, Polish 0.015959, Uygur 0.013556, Estonian 0.012050, Burusho 0.011723
=== Cluster 18 ===
Mbuti 0.999809, Luo 0.040874, Hadza 0.026030, Mende 0.025507, Luhya 0.023974, Sandawe 0.020952, BantuKenya 0.019382
=== Cluster 19 ===
Khomani_San 0.999810, Ju_hoan_North 0.999810, BantuTswana 0.242737, Sandawe 0.095828, Hadza 0.059400, Aari 0.056240, BantuHerero 0.052442
[ F ] EUR : WEST MED : LEV, 75- : 24+ : <1
K = 30, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.670605 0.000010 0.000010 0.000010 0.004846 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.324279 0.000010 0.000010, CV error (K=30) 0.76483, Loglikelihood: -44089814.067007.
=== Cluster 0 ===
Sandawe 0.613857, Hadza 0.528659, Iraqw 0.097957, Aari 0.092655, Masai 0.043756, Ogiek 0.040970, Kikuyu 0.028000
=== Cluster 1 ===
Dinka 0.999710, Mursi 0.999710, Sengwer 0.698958, Bulala 0.539289, Mada 0.357239, Ogiek 0.320389, Masai 0.284206
=== Cluster 2 ===
Pima 0.999710, Chipewyan 0.999710, Cree 0.320298, Mixtec 0.033710, Altaian 0.017932, Chechen 0.015674, Tubalar 0.012075
=== Cluster 3 ===
Fulani 0.999710, Saharawi 0.084124, Mozabite 0.065665, Bulala 0.024972, Agaw 0.013682, Spanish 0.011027, Jordanian 0.009525
=== Cluster 4 ===
BedouinB 0.999710, Yemenite_Jew 0.999710, Palestinian 0.220126, Agaw 0.187742, Saharawi 0.178695, Iraqi_Jew 0.175968, Druze 0.141253
=== Cluster 5 ===
Aleut 0.999710, Tlingit 0.717592, Chukchi 0.032708, Maori 0.030641, North_Ossetian 0.021808, Cree 0.021068, Russian 0.021018
=== Cluster 6 ===
Gambian 0.999710, Mandenka 0.999710, Esan 0.677501, Mende 0.490089, Yoruba 0.322865, Igbo 0.306115, Kaba 0.289860,
=== Cluster 7 ===
Atayal 0.999710, Igorot 0.999710, Ami 0.999710, Hawaiian 0.927676, Dusun 0.641357, Maori 0.287588, Han 0.043477
=== Cluster 8 === 67,06%
Finnish 0.994898, Estonian 0.909607, Norwegian 0.801604, Saami 0.784912, Icelandic 0.756620, Russian 0.720639, Orcadian 0.695469
=== Cluster 9 ===
Irula 0.999710, Mala 0.999320, Madiga 0.981783, Kurumba 0.927560, Relli 0.847813, Yadava 0.813729, Kapu 0.799879
=== Cluster 10 ===
Papuan 0.617216, Australian 0.083339, Brahui 0.005109, Burmese 0.004785, Iranian 0.002466, Iraqi_Jew 0.002461, Spanish 0.002029
=== Cluster 11 ===
Bougainville 0.999710, Hawaiian 0.068656, Australian 0.066465, Maori 0.060560, Polish 0.009899, Turkish 0.005292, Relli 0.005074
=== Cluster 12 === 0,48%
Samaritan 0.999710, Jordanian 0.353358, Druze 0.050432, Palestinian 0.033024, Armenian 0.029628, Crete 0.027307, Iraqi_Jew 0.027049
=== Cluster 13 ===
Eskimo_Chaplin 0.999710, Eskimo_Sireniki 0.999710, Eskimo_Naukan 0.999710, Itelman 0.531599, Chukchi 0.328694, Mansi 0.063550, Cree 0.057187
=== Cluster 14 ===
Kusunda 0.999710, Kharia 0.022645, Bengali 0.016160, Uygur 0.013496, Xibo 0.011133, Burusho 0.010796, Altaian 0.008003,
=== Cluster 15 ===
Baka 0.999710, Biaka 0.999710, Bedzan 0.999710, Bakola 0.999710, Ngumba 0.113934, Hadza 0.028869, Lemande 0.024675
=== Cluster 16 ===
Kongo 0.970068, BantuHerero 0.931257, Lemande 0.913726, Ngumba 0.885784, Tikar_South 0.860974, BantuKenya 0.824821, Luhya 0.785443
=== Cluster 17 ===
Kalash 0.999710, Makrani 0.797299, Balochi 0.669852, Brahui 0.573722, Tajik 0.530399, Abkhasian 0.476852, Iranian 0.457920
=== Cluster 18 ===
Surui 0.999710, Karitiana 0.999710, Piapoco 0.225305, Chane 0.217623, Quechua 0.116014, Mayan 0.093664, Uygur 0.011748
=== Cluster 19 ===
Sherpa 0.999710, Tibetan 0.999710, Naxi 0.431203, Yi 0.412523, Tu 0.385580, Korean 0.283853, Burmese 0.265645
=== Cluster 20 ===
Papuan 0.382503, Maori 0.051235, Australian 0.028784, Kurumba 0.017935, Cambodian 0.012546, Druze 0.006851, Kharia 0.006151
=== Cluster 21 ===
Mbuti 0.999710, Aari 0.026915, Luo 0.026027, Ogiek 0.021844, Luhya 0.018236, Mende 0.014374, BantuKenya 0.012944
=== Cluster 22 ===
Somali 0.999710, Iraqw 0.874934, Rendille 0.853081, Agaw 0.728506, Amhara 0.668524, Elmolo 0.653965, Aari 0.640203
=== Cluster 23 ===
Ulchi 0.999710, Oroqen 0.999710, Yakut 0.991706, Even 0.953188, Hezhen 0.636270, Daur 0.506730, Altaian 0.483015
=== Cluster 24 ===
Onge 0.999710, Cambodian 0.028243, Kurumba 0.020265, Kharia 0.019102, Khonda_Dora 0.017259, Thai 0.016989, Burmese 0.014188
=== Cluster 25 ===
Australian 0.821141, Khonda_Dora 0.021864, Maori 0.008309, Thai 0.006606, Kurumba 0.004478, Mixtec 0.004315, Tu 0.003935
=== Cluster 26 ===
Dai 0.999710, Kinh 0.956314, Lahu 0.935765, Thai 0.873384, Cambodian 0.820438, Miao 0.779927, She 0.766636
=== Cluster 27 === 32,43%
Sardinian 0.999710, Spanish 0.587387, Albanian 0.566496, Basque 0.563693, Turkish 0.537726, Bergamo 0.534684, Crete 0.525510
=== Cluster 28 ===
Zapotec 0.999710, Mixe 0.999710, Nahua 0.999710, Mayan 0.906056, Quechua 0.883703, Mixtec 0.823184, Chane 0.782097
=== Cluster 29 ===
Khomani_San 0.999710, Ju_hoan_North 0.999707, BantuTswana 0.243889, Aari 0.066302, BantuHerero 0.053578, Sandawe 0.046474, Elmolo 0.017533
K = 40, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.001425 0.334668 0.002182 0.000010 0.004408 0.000010 0.000010 0.000010 0.000010 0.000010 0.656967 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=40) 0.91032, Loglikelihood: -43286868.536141.
=== Cluster 0 ===
Georgian 0.999610, Abkhasian 0.969769, Adygei 0.728596, North_Ossetian 0.711274, Armenian 0.662019, Lezgin 0.644548, Makrani 0.617325
=== Cluster 1 ===
Mozabite 0.999610, Saharawi 0.999610, Fulani 0.125703, Samaritan 0.102734, Palestinian 0.073421, Iraqi_Jew 0.065741, Amhara 0.057737
=== Cluster 2 ===
Chipewyan 0.999610, Cree 0.198045, Aleut 0.071823, Tlingit 0.055488, Chechen 0.012218, Kyrgyz 0.006247, Chukchi 0.005925
=== Cluster 3 ===
Brahmin 0.535628, Bengali 0.523842, Pathan 0.066930, Kashmiri_Pandit 0.063010, Madiga 0.060848, Relli 0.054200, Tajik 0.046483
=== Cluster 4 ===
Sherpa 0.999610, Tibetan 0.999610, Naxi 0.409773, Yi 0.391488, Tu 0.364482, Korean 0.258276, Burmese 0.252489
=== Cluster 5 ===
Papuan 0.650467, Australian 0.094273, Maori 0.010239, Burmese 0.006396, Iraqi_Jew 0.002536, Kharia 0.002277, Iranian 0.002091
=== Cluster 6 ===
Australian 0.821452, Khonda_Dora 0.022715, Hawaiian 0.010768, Maori 0.008787, Chechen 0.006784, Thai 0.006534, Tu 0.003808
=== Cluster 7 ===
Pima 0.999610, Cree 0.040340, Mixtec 0.034055, Nahua 0.028573, Tlingit 0.018860, Aleut 0.012653, Pathan 0.007807
=== Cluster 8 ===
Kusunda 0.999610, Kharia 0.023231, Uygur 0.013237, Burusho 0.010712, Xibo 0.010625, Altaian 0.009099, Tu 0.005381
=== Cluster 9 ===
Papuan 0.349153, Maori 0.040057, Kurumba 0.022132, Australian 0.017218, Cambodian 0.013650, Armenian 0.005000, Kharia 0.004644
=== Cluster 10 ===
Bedzan 0.999610, Baka 0.667784, Ngumba 0.045797, BantuHerero 0.035748, Hadza 0.028308, Kongo 0.025401, BantuTswana 0.013898
=== Cluster 11 ===
Khomani_San 0.999610, Ju_hoan_North 0.999610, BantuTswana 0.240678, Aari 0.074687, Hadza 0.065756, Sandawe 0.052693, BantuHerero 0.051167
=== Cluster 12 ===
Crete 0.547153, Druze 0.535032, English 0.507637, Turkish 0.087388, Albanian 0.073822, Iraqi_Jew 0.070174, Armenian 0.061973
=== Cluster 13 ===
Oroqen 0.999610, Ulchi 0.999610, Yakut 0.973890, Even 0.950386, Hezhen 0.639992, Daur 0.484606, Itelman 0.466726
=== Cluster 14 ===
Tubalar 0.999610, Kyrgyz 0.509291, Altaian 0.174379, Mansi 0.122788, Tajik 0.065154, Hazara 0.062551, Russian 0.052237
=== Cluster 15 ===
Biaka 0.999610, Bakola 0.999610, Baka 0.331836, Ngumba 0.087371, Kongo 0.057622, Tikar_South 0.041603, Lemande 0.033383
=== Cluster 16 ===
Bougainville 0.999610, Hawaiian 0.075543, Australian 0.066697, Maori 0.061050, Relli 0.006554, Turkish 0.005407, Polish 0.004404
=== Cluster 17 ===
Kalash 0.999607, Burusho 0.056031, Tajik 0.048551, Kashmiri_Pandit 0.048084, Balochi 0.042602, Makrani 0.040401, Chechen 0.032038
=== Cluster 18 ===
Saami 0.999610, French 0.333210, Mansi 0.104442, Chukchi 0.050214, Altaian 0.043213, Hazara 0.039911, Iranian 0.037824
=== Cluster 19 ===
Eskimo_Sireniki 0.999610, Eskimo_Naukan 0.999610, Eskimo_Chaplin 0.999610, Itelman 0.532894, Aleut 0.399506, Chukchi 0.342879, Tlingit 0.303554
=== Cluster 20 ===
Dai 0.999610, Kinh 0.946562, Lahu 0.942615, Thai 0.861913, Cambodian 0.814002, She 0.805818, Miao 0.795239
=== Cluster 21 === 0,14%
Jordanian 0.685274, Samaritan 0.074663, Iraqi_Jew 0.052712, Palestinian 0.045741, Armenian 0.043334, Greek 0.041376, Albanian 0.035761
=== Cluster 22 === 33,47%
Sardinian 0.999610, Basque 0.999610, Spanish 0.745770, Bergamo 0.404893, Albanian 0.371870, [SampleName] 0.334668, Tuscan 0.319781
=== Cluster 23 === 0,22%
Yemenite_Jew 0.559685, Sindhi 0.516968, Iraqi_Jew 0.055083, Kashmiri_Pandit 0.046093, Palestinian 0.036997, Samaritan 0.035368, Iranian 0.031670
=== Cluster 24 ===
Dusun 0.999610, Ami 0.999610, Igorot 0.999610, Atayal 0.999610, Hawaiian 0.913319, Maori 0.301709, Kinh 0.050244
=== Cluster 25 === 0,44%
Brahui 0.545393, French 0.333210, Balochi 0.067253, Kashmiri_Pandit 0.050372, Kapu 0.048669, Polish 0.040233, Makrani 0.040086
=== Cluster 26 ===
Mandenka 0.999610, Mende 0.992039, Igbo 0.983329, Gambian 0.931002, Esan 0.864379, Yoruba 0.677711, Laka 0.548993
=== Cluster 27 ===
Surui 0.999586, Chane 0.104581, Piapoco 0.091236, Quechua 0.044770, Mayan 0.042248, Aleut 0.013555, Zapotec 0.011307
=== Cluster 28 ===
Mada 0.999610, Fulani 0.873916, Bulala 0.101960, Gambian 0.067347, Laka 0.041390, Kaba 0.032014, Makrani 0.023208
=== Cluster 29 ===
Rendille 0.999610, Somali 0.999610, Iraqw 0.877572, Agaw 0.707125, Amhara 0.673976, Aari 0.671685, Elmolo 0.665929
=== Cluster 30 ===
Irula 0.998960, Mala 0.998012, Madiga 0.919379, Kurumba 0.916503, Yadava 0.842677, Relli 0.815803, Kapu 0.811132
=== Cluster 31 === 65,7%
Estonian 0.999610, Finnish 0.997760, Russian 0.807200, Norwegian 0.772491, Icelandic 0.721035, Czech 0.683915, Orcadian 0.679026
=== Cluster 32 ===
Mixe 0.999610, Zapotec 0.988313, Nahua 0.964678, Mayan 0.917289, Quechua 0.899559, Mixtec 0.813383, Chane 0.809683
=== Cluster 33 ===
Mursi 0.999610, Dinka 0.999610, Sengwer 0.466170, Bulala 0.423523, Masai 0.229876, Luo 0.212554, Aari 0.189768
=== Cluster 34 ===
Onge 0.999610, Cambodian 0.028975, Kurumba 0.022225, Kharia 0.021977, Khonda_Dora 0.020332, Thai 0.018055, Burmese 0.015380
=== Cluster 35 ===
Ogiek 0.999610, Sandawe 0.596701, Hadza 0.104837, Iraqw 0.072232, Masai 0.052770, Sengwer 0.043151, Kikuyu 0.042384
=== Cluster 36 ===
BedouinB 0.999610, Palestinian 0.080824, Samaritan 0.078405, Yemenite_Jew 0.052609, Agaw 0.050815, Armenian 0.044750, Iraqi_Jew 0.041607
=== Cluster 37 ===
Luhya 0.999610, BantuKenya 0.999610, Luo 0.774126, Lemande 0.735390, BantuTswana 0.611665, Kongo 0.514527, Ngumba 0.485617
=== Cluster 38 ===
Mbuti 0.999610, Aari 0.025451, Hadza 0.024508, Sengwer 0.017414, Luo 0.012950, Kikuyu 0.010674, Iraqw 0.010667
=== Cluster 39 ===
Karitiana 0.999610, Piapoco 0.099676, Chane 0.085367, Quechua 0.050294, Mayan 0.034244, Altaian 0.016140, Uygur 0.009515
[ G ] EUR : ACADIA : WEST MED : LEV, 65+ : 5- : 25 : 5-
K = 50, first run, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.259572 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.679639 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.035912 0.024417 0.000010 0.000010 0.000010 0.000010 0.000010.
K = 50, second run, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.259572 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.679639 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.035912 0.024417 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=50): 1.01047, Loglikelihood: -42514601.602359.
=== Cluster 0 ===
Ju_hoan_North 0.999510, BantuTswana 0.132144, Aari 0.068846, BantuHerero 0.044611, Sandawe 0.033735, Iraqw 0.019716, Sengwer 0.015353
=== Cluster 1 ===
Mursi 0.999510, Dinka 0.999509, Sengwer 0.475988, Bulala 0.432981, Ogiek 0.273746, Luo 0.249963, Aari 0.181202
=== Cluster 2 ===
Lemande 0.972518, Kongo 0.948979, BantuHerero 0.920895, Tikar_South 0.893385, Ngumba 0.868973, Esan 0.838631, Igbo 0.817563
=== Cluster 3 ===
Mozabite 0.557418, Saharawi 0.073940, Druze 0.008873, Mixtec 0.008736, Spanish 0.007960, Palestinian 0.007256, North_Ossetian 0.006692
=== Cluster 4 ===
Oroqen 0.999510, Yakut 0.999510, Even 0.956681, Ulchi 0.857187, Hezhen 0.507363, Itelman 0.467587, Altaian 0.393827
=== Cluster 5 ===
Saami 0.999510, Russian 0.534726, Mansi 0.063231, Even 0.042839, Altaian 0.037825, Cree 0.032241, Adygei 0.028390
=== Cluster 6 ===
Onge 0.999510, Kurumba 0.023812, Cambodian 0.023235, Kharia 0.023130, Khonda_Dora 0.017127, Burmese 0.012518, Kapu 0.007451
=== Cluster 7 ===
Sandawe 0.577719, Mada 0.558176, Bulala 0.032143, Makrani 0.020267, Luhya 0.017219, Brahui 0.011719, Balochi 0.005762
=== Cluster 8 ===
Punjabi 0.595498, Yadava 0.499760, Mala 0.333177, Makrani 0.141588, Kapu 0.119270, Hazara 0.072781, Kashmiri_Pandit 0.065424
=== Cluster 9 ===
Masai 0.999510, Elmolo 0.517308, Sengwer 0.088360, Bulala 0.043464, BantuKenya 0.040424, Aari 0.025952, Sandawe 0.025745
=== Cluster 10 ===
Kalash 0.999510, Burusho 0.051949, Kashmiri_Pandit 0.045351, Tajik 0.042887, Balochi 0.031767, Brahmin 0.031425, Sindhi 0.031305
=== Cluster 11 ===
Papuan 0.620440, Australian 0.085540, Burmese 0.005375, Maori 0.004607, Iraqi_Jew 0.004105, Iranian 0.001962, Bulgarian 0.001105
=== Cluster 12 ===
Pima 0.999510, Cree 0.043909, Mayan 0.034929, Chane 0.027891, Mixtec 0.023745, Tlingit 0.017626, Aleut 0.013862
=== Cluster 13 ===
Biaka 0.999510, Baka 0.999510, Bedzan 0.999510, Bakola 0.999510, Ngumba 0.120557, Kongo 0.037415, Hadza 0.036473
=== Cluster 14 === 25,96%
Basque 0.999510, Sardinian 0.999509, Bergamo 0.367475, Albanian 0.364309, Tuscan 0.311860, English 0.307098, Saharawi 0.294851
=== Cluster 15 ===
Tibetan 0.999510, Sherpa 0.999510, Naxi 0.287502, Yi 0.280947, Tu 0.264691, Burmese 0.179511, Mongola 0.075467
=== Cluster 16 ===
Irula 0.999510, Kurumba 0.041155, Makrani 0.017269, Kyrgyz 0.015115, Burmese 0.008221, Turkish 0.006583, Punjabi 0.004030
=== Cluster 17 ===
Chipewyan 0.999510, Cree 0.201910, Aleut 0.072611, Tlingit 0.055535, Bengali 0.012805, Chechen 0.011757, Mixtec 0.009149
=== Cluster 18 ===
Ami 0.999510, Atayal 0.999510, Igorot 0.999510, Hawaiian 0.720799, Maori 0.244089, Dusun 0.224100, Kinh 0.110687
=== Cluster 19 ===
Surui 0.999510, Chane 0.097711, Piapoco 0.048955, Mayan 0.036541, Aleut 0.012561, Mongola 0.008188, Mixtec 0.005202
=== Cluster 20 ===
Kusunda 0.999510, Kharia 0.022204, Bengali 0.015558, Uygur 0.012750, Burusho 0.011360, Xibo 0.010878, Altaian 0.006259
=== Cluster 21 ===
BedouinB 0.999510, Saharawi 0.077028, Palestinian 0.055382, Agaw 0.037022, Iraqi_Jew 0.033096, Armenian 0.031850, Iranian 0.023363
=== Cluster 22 ===
Estonian 0.499760, Crete 0.499760, Czech 0.046615, Relli 0.039024, Yadava 0.036150, Icelandic 0.031060, Amhara 0.030130
=== Cluster 23 ===
Piapoco 0.615496, Chane 0.058544, Mayan 0.035641, Mixtec 0.012496, Kashmiri_Pandit 0.009402, Cree 0.007831, Tubalar 0.006637
=== Cluster 24 === 67,96%
Finnish 0.973281, Norwegian 0.794361, Polish 0.706827, Orcadian 0.703348, Icelandic 0.695242, [SampleName] 0.679639, Czech 0.658490
=== Cluster 25 ===
Dusun 0.775420, Miao 0.571198, Hawaiian 0.157706, Burmese 0.047665, Tu 0.043923, Maori 0.043130, Kinh 0.037688
=== Cluster 26 ===
Kaba 0.559079, Laka 0.554505, Bulala 0.057985, Mada 0.036243, Tikar_South 0.033735, Yoruba 0.031153, Ogiek 0.026484
=== Cluster 27 ===
Korean 0.999510, Japanese 0.999510, Han 0.721985, Xibo 0.646063, Tujia 0.625896, Mongola 0.604656, She 0.567905
=== Cluster 28 ===
Khomani_San 0.999510, BantuTswana 0.101788, BantuHerero 0.009128, Sandawe 0.007836, Ogiek 0.007508, Elmolo 0.005351, Kikuyu 0.005337
=== Cluster 29 ===
Yemenite_Jew 0.999510, Samaritan 0.999500, Jordanian 0.391645, Druze 0.211321, Iraqi_Jew 0.198208, Agaw 0.165253, Amhara 0.149287
=== Cluster 30 ===
Bougainville 0.999510, Hawaiian 0.073057, Australian 0.066474, Maori 0.062266, Relli 0.004874, Kharia 0.004383, Polish 0.003621
=== Cluster 31 ===
Somali 0.999510, Rendille 0.989966, Iraqw 0.951984, Agaw 0.688500, Amhara 0.665428, Aari 0.660529, Ogiek 0.601536
=== Cluster 32 ===
Abkhasian 0.921920, Georgian 0.915888, North_Ossetian 0.726330, Adygei 0.723701, Makrani 0.654878, Iranian 0.620606, Armenian 0.607916
=== Cluster 33 ===
Lezgin 0.499760, Adygei 0.018139, Tubalar 0.012514, Maori 0.011534, Iranian 0.009248, Druze 0.007942, Xibo 0.007753
=== Cluster 34 ===
Eskimo_Sireniki 0.999510, Eskimo_Chaplin 0.999510, Eskimo_Naukan 0.999510, Itelman 0.531933, Aleut 0.392459, Chukchi 0.342252, Tlingit 0.302079
=== Cluster 35 ===
Hadza 0.499760, Aari 0.027533, Ogiek 0.017503, Iraqw 0.015333, Sandawe 0.012573, Sengwer 0.008025, Luo 0.007573
=== Cluster 36 ===
Madiga 0.999510, Relli 0.897796, Kurumba 0.874208, Kapu 0.740629, Bengali 0.714441, Kharia 0.703985, Mala 0.666343
=== Cluster 37 ===
Mansi 0.586540, Hazara 0.583730, Tubalar 0.073708, Altaian 0.031524, Cree 0.025139, Burusho 0.022317, Tu 0.021688
=== Cluster 38 ===
Turkish 0.504552, Bulgarian 0.012283, Greek 0.011911, Bergamo 0.011804, English 0.011484, Armenian 0.011083, Iraqi_Jew 0.010469
=== Cluster 39 ===
Fulani 0.999510, Saharawi 0.078282, Mozabite 0.034008, Bulala 0.020799, Agaw 0.012823, Spanish 0.004631, Jordanian 0.003518
=== Cluster 40 ===
Papuan 0.379080, Maori 0.045781, Australian 0.026374, Kurumba 0.017988, Cambodian 0.007165, Kharia 0.005915, Druze 0.005677
=== Cluster 41 ===
Quechua 0.999510, Mayan 0.328045, Chane 0.297621, Piapoco 0.111456, Cree 0.081331, Aleut 0.051389, Mixtec 0.050049
=== Cluster 42 ===
Nahua 0.999510, Mixe 0.999510, Zapotec 0.996202, Mixtec 0.760101, Mayan 0.533214, Chane 0.440509, Cree 0.255754
=== Cluster 43 === 3,59%
Brahui 0.541937, Palestinian 0.362623, Jordanian 0.345888, Druze 0.078237, Saharawi 0.063079, Agaw 0.052309, Armenian 0.051171
=== Cluster 44 === 2,44%
Spanish 0.525852, French 0.349800, Icelandic 0.062850, Bulgarian 0.041548, Norwegian 0.041123, Hungarian 0.038749, North_Ossetian 0.031634
=== Cluster 45 ===
Dai 0.999510, Lahu 0.941711, Cambodian 0.876531, Thai 0.812295, Kinh 0.584541, She 0.369055, Tujia 0.334845
=== Cluster 46 ===
Mbuti 0.999510, Luo 0.032408, Aari 0.027550, Luhya 0.024189, Ogiek 0.024134, Sengwer 0.020955, BantuKenya 0.017360
=== Cluster 47 ===
Karitiana 0.999503, Chane 0.077284, Piapoco 0.044369, Mayan 0.029658, Altaian 0.017849, Uygur 0.007766, Iranian 0.006236
=== Cluster 48 ===
Australian 0.821153, Khonda_Dora 0.022434, Hawaiian 0.019537, Maori 0.008743, Kurumba 0.007993, Thai 0.006739, Chechen 0.006554
=== Cluster 49 ===
Mandenka 0.999510, Gambian 0.999510, Mende 0.396570, Yoruba 0.197469, Igbo 0.170556, Esan 0.160883, Mada 0.081900
[ H ] EUR : WEST MED : 2xASHK : LEV, 50- : 50- : 6 + 3 : <1
K = 57, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.446177 0.000010 0.000166 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.026035 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.002468 0.000010 0.000010 0.000010 0.000010 0.003884 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.002673 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.062727 0.000010 0.000010 0.000010 0.000010 0.455378 0.000010, CV error (K=57): 1.08873, Converged in 170 iterations (63850 sec), Loglikelihood: -41990983.890577.
=== Cluster 0 ===
Luo 0.999440, Ngumba 0.601889, BantuKenya 0.238160, Kongo 0.213337, Kikuyu 0.170181, Lemande 0.158646, BantuTswana 0.139489
=== Cluster 1 ===
Pima 0.999440, Cree 0.038533, Mixtec 0.016203, Aleut 0.013287, Altaian 0.006051, Tubalar 0.005246, Tajik 0.002989
=== Cluster 2 ===
Yi 0.515949, Naxi 0.014282, Mongola 0.010167, Miao 0.009602, Tibetan 0.007719, Kyrgyz 0.006667, Tu 0.006241
=== Cluster 3 ===
Even 0.999440, Yakut 0.999440, Mansi 0.264199, Tubalar 0.186865, Oroqen 0.181280, Altaian 0.164470, Kyrgyz 0.140338
=== Cluster 4 === 44,62%
Basque 0.999440, English 0.718080, Icelandic 0.685909, French 0.609863, Spanish 0.499907, Orcadian 0.449821, [SampleName] 0.446177
=== Cluster 5 ===
Ogiek 0.999439, Hadza 0.499725, Sengwer 0.098532, Rendille 0.097573, Kikuyu 0.084760, Iraqw 0.083906, Sandawe 0.080995
=== Cluster 6 === 0,02% [SAMARKAND DRIFT]
Balochi 0.999440, Kashmiri_Pandit 0.018659, Pathan 0.013334, Makrani 0.012980, Iranian 0.008228, Orcadian 0.008219, Burusho 0.008105
=== Cluster 7 ===
Kalash 0.999440, Makrani 0.560681, Burusho 0.095949, Kashmiri_Pandit 0.088494, Pathan 0.062765, Adygei 0.060906, North_Ossetian 0.054755
=== Cluster 8 ===
Zapotec 0.999440, Nahua 0.999440, Piapoco 0.838456, Chane 0.807778, Mixtec 0.805966, Quechua 0.490595, Mayan 0.464494
=== Cluster 9 ===
Iraqw 0.537532, Sandawe 0.030793, Rendille 0.019153, Kikuyu 0.014422, BantuHerero 0.006481, Elmolo 0.006416, Sengwer 0.005854
=== Cluster 10 ===
Chipewyan 0.999440, Cree 0.195831, Aleut 0.035294, Tlingit 0.010542, Mixtec 0.007858, Chukchi 0.006645, Bengali 0.006194
=== Cluster 11 ===
Baka 0.999440, Bakola 0.708342, Biaka 0.300120, Kongo 0.050522, BantuHerero 0.046788, Ngumba 0.039693, Sandawe 0.024955
=== Cluster 12 ===
Khomani_San 0.999440, Ju_hoan_North 0.999440, BantuTswana 0.241521, Sandawe 0.101899, Aari 0.074182, BantuHerero 0.052159, Elmolo 0.018950
=== Cluster 13 ===
Chechen 0.999440, Iranian 0.536587, Georgian 0.063924, Abkhasian 0.061537, Turkish 0.061203, Iraqi_Jew 0.060158, North_Ossetian 0.060119
=== Cluster 14 === 2,6% [1xASHK = EAST MED I]
Bulgarian 0.503362, Saami 0.499725, Mansi 0.049884, Kashmiri_Pandit 0.041931, Chukchi 0.030224, [SampleName] 0.026035, Palestinian 0.021841
=== Cluster 15 ===
Igorot 0.999440, Atayal 0.999440, Ami 0.999437, Hawaiian 0.658384, Maori 0.225763, She 0.059520, Han 0.057211
=== Cluster 16 ===
Papuan 0.620378, Australian 0.085630, Maori 0.005153, Burmese 0.002208, Kapu 0.001756, Palestinian 0.001600, Bulgarian 0.001597
=== Cluster 17 ===
Dusun 0.999440, Hawaiian 0.052769, Maori 0.027711, Burmese 0.025211, Khonda_Dora 0.020138, Thai 0.015715, Miao 0.014558
=== Cluster 18 ===
Onge 0.999440, Kharia 0.017606, Khonda_Dora 0.013491, Kapu 0.005954, Burmese 0.005803, Tibetan 0.005124, Uygur 0.003504
=== Cluster 19 ===
Samaritan 0.999440, Druze 0.499725, Tuscan 0.037970, Palestinian 0.026513, Greek 0.025215, Orcadian 0.020381, Yemenite_Jew 0.020121
=== Cluster 20 ===
Elmolo 0.504785, Rendille 0.035299, Sengwer 0.009621, Sandawe 0.009281, Iraqw 0.006193, Kikuyu 0.004006, Bulala 0.003675
=== Cluster 21 ===
Mixe 0.999440, Quechua 0.450810, Cree 0.066210, Mixtec 0.038934, Aleut 0.014645, Hazara 0.003399, Tu 0.001286
=== Cluster 22 ===
Tlingit 0.867476, Aleut 0.598823, Saami 0.499725, Maori 0.062327, Mansi 0.055701, Russian 0.050227, Cree 0.049857
=== Cluster 23 ===
Australian 0.821082, Khonda_Dora 0.020372, Hawaiian 0.015052, Maori 0.008413, Thai 0.005188, Tu 0.003864, Mixtec 0.003650
=== Cluster 24 ===
Kurumba 0.999440, Yadava 0.551482, Brahmin 0.530548, Kashmiri_Pandit 0.052320, Thai 0.044611, Hazara 0.043702, Burusho 0.031757
=== Cluster 25 ===
Ulchi 0.999440, Oroqen 0.818170, Hezhen 0.704756, Itelman 0.467922, Daur 0.304829, Altaian 0.264854, Kyrgyz 0.217562
=== Cluster 26 ===
Sherpa 0.999440, Tibetan 0.759307, Tu 0.618801, Naxi 0.285925, Yi 0.149103, Mongola 0.084534, Xibo 0.078643
=== Cluster 27 ===
Lahu 0.999440, Thai 0.580902, Kinh 0.499725, Hawaiian 0.198209, Miao 0.170421, Tujia 0.129990, Khonda_Dora 0.124521
=== Cluster 28 ===
Bulala 0.547944, Kaba 0.521117, Somali 0.125286, Laka 0.115192, Mada 0.055495, Rendille 0.038934, Tikar_South 0.018754
=== Cluster 29 ===
Relli 0.499725, Punjabi 0.311879, Kashmiri_Pandit 0.025180, Kapu 0.022992, Hazara 0.017742, Altaian 0.013289, Tu 0.011274
=== Cluster 30 === 0,25% [CAUCASUS DRIFT]
Brahui 0.575106, Tajik 0.574434, Lezgin 0.557125, Georgian 0.142877, Abkhasian 0.139498, Adygei 0.139260, Pathan 0.121898
=== Cluster 31 ===
Cambodian 0.999440, Burmese 0.594375, Kinh 0.499725, Thai 0.181235, Khonda_Dora 0.179136, Kharia 0.163269, Relli 0.040935
=== Cluster 32 ===
Bougainville 0.999440, Hawaiian 0.069123, Australian 0.066500, Maori 0.061249, Polish 0.008341, Turkish 0.004312, Palestinian 0.004009
=== Cluster 33 ===
Dai 0.999440, She 0.304612, Miao 0.192322, Tujia 0.151502, Han 0.094479, Thai 0.072142, Naxi 0.049909
=== Cluster 34 ===
Irula 0.999440, Madiga 0.890170, Kapu 0.787941, Kharia 0.697006, Mala 0.666297, Khonda_Dora 0.636212, Relli 0.458021
=== Cluster 35 === 0,39% [LEV]
Jordanian 0.335569, Iraqi_Jew 0.006594, Bengali 0.006172, Yemenite_Jew 0.005160, Spanish 0.005014, Turkish 0.004580, Hungarian 0.004478
=== Cluster 36 ===
Sardinian 0.381607, Spanish 0.026231, Bergamo 0.025579, Albanian 0.021937, Saharawi 0.012616, Greek 0.011088, Crete 0.010377
=== Cluster 37 ===
Mursi 0.999440, Dinka 0.999440, Sengwer 0.463543, Aari 0.268092, Rendille 0.178001, Bulala 0.156681, Mada 0.112851
=== Cluster 38 ===
Surui 0.999440, Chane 0.097675, Piapoco 0.077033, Quechua 0.022734, Aleut 0.017052, Mayan 0.009953, Mongola 0.007194
=== Cluster 39 ===
Agaw 0.999440, Amhara 0.989343, Somali 0.874164, Rendille 0.502282, Aari 0.484370, Sandawe 0.300396, Kikuyu 0.202506
=== Cluster 40 ===
Luhya 0.520619, Hadza 0.499725, Sandawe 0.072225, Aari 0.067008, BantuKenya 0.047168, Iraqw 0.034762, Sengwer 0.032484
=== Cluster 41 ===
Masai 0.999440, Mada 0.566925, Sengwer 0.110551, Sandawe 0.064258, Rendille 0.053803, Kikuyu 0.051255, Iraqw 0.031961
=== Cluster 42 === 0,28% [AMD ASIA DRIFT]
Mayan 0.521359, Chane 0.022867, Tubalar 0.010840, Hazara 0.005267, Burmese 0.003889, Altaian 0.003517, Piapoco 0.003089
=== Cluster 43 ===
Eskimo_Naukan 0.999440, Eskimo_Chaplin 0.999440, Eskimo_Sireniki 0.999440, Itelman 0.531528, Chukchi 0.337470, Aleut 0.317791, Tlingit 0.121441
=== Cluster 44 ===
Yoruba 0.996972, Igbo 0.990681, Esan 0.988987, Mende 0.976113, Mandenka 0.948812, Gambian 0.924167, Tikar_South 0.790833
=== Cluster 45 ===
Saharawi 0.643338, Mozabite 0.627985, Iraqw 0.022251, Mixtec 0.022047, Palestinian 0.021930, Spanish 0.018514, Sardinian 0.018259
=== Cluster 46 ===
Papuan 0.379072, Maori 0.046287, Australian 0.026259, Hawaiian 0.005954, Druze 0.005567, Kharia 0.005308, Armenian 0.003583
=== Cluster 47 ===
Fulani 0.999438, Gambian 0.056920, Mandenka 0.046151, Saharawi 0.045419, Mozabite 0.031446, Bulala 0.020194, Rendille 0.008672
=== Cluster 48 ===
BedouinB 0.999440, Yemenite_Jew 0.094167, Palestinian 0.062563, Saharawi 0.032931, Rendille 0.025882, Iraqi_Jew 0.023077, Crete 0.021725
=== Cluster 49 ===
Karitiana 0.999439, Piapoco 0.080892, Chane 0.071149, Quechua 0.035331, Altaian 0.015314, Uygur 0.008563, Iranian 0.005315
=== Cluster 50 === 6,27% [1xASHK = EAST MED II]
Armenian 0.754412, Iraqi_Jew 0.752863, Georgian 0.733966, Palestinian 0.692600, Abkhasian 0.689777, Yemenite_Jew 0.679656, Turkish 0.629444
=== Cluster 51 ===
Mbuti 0.999440, Aari 0.021805, Sandawe 0.021066, Sengwer 0.018923, Mende 0.017293, BantuHerero 0.015747, Luhya 0.012488
=== Cluster 52 ===
Kusunda 0.999440, Kharia 0.023990, Uygur 0.012073, Xibo 0.011086, Bengali 0.009567, Burusho 0.008891, Tibetan 0.008080
=== Cluster 53 ===
Korean 0.999440, Japanese 0.999440, Han 0.754785, Tujia 0.677415, Xibo 0.630796, She 0.626674, Naxi 0.544847
=== Cluster 54 ===
Bedzan 0.999440, Biaka 0.699329, Bakola 0.291108, Lemande 0.048242, Kongo 0.035565, Tikar_South 0.0333, Ngumba 0.030126
=== Cluster 55 === 45,54% [EUR NORTH WEST]
Norwegian 0.999440, Finnish 0.999440, Estonian 0.999440, Russian 0.751123, Czech 0.537319, Polish 0.536947, Hungarian 0.501027
=== Cluster 56 ===
Sindhi 0.609346, Bengali 0.546667, Mala 0.333153, Punjabi 0.249867, Pathan 0.195343, Kashmiri_Pandit 0.188277, Burusho 0.160220
K = 58, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.005503 0.000010 0.000010 0.230714 0.098527 0.000010 0.498499 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.001053 0.000010 0.000010 0.000010 0.000010 0.000010 0.101878 0.005705 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.028398 0.000010 0.001611 0.000010 0.000010 0.000010 0.000010 0.026295 0.001348, CV error (K=58): 1.10719, Converged in 136 iterations (52750.8 sec), Loglikelihood: -41901665.971682.
Cluster 9 [EAST MED I] ~ 0,55% (Jordanian 0.333150, Turkish 0.008819, Crete 0.007623, Chechen 0.006603, Bulgarian 0.006481, Iraqi_Jew 0.006454, Bengali 0.006034)
Cluster 12 [WEST MED] ~ 23,07% (Basque 0.999430, Sardinian 0.999430, French 0.331854, Albanian 0.323850, Bulgarian 0.250856, Tuscan 0.245963, [SampleName] 0.230714)
Cluster 13 [SCANDINAVIC EAST DRIFT] ~ 9,85% (Saami 0.999430, Orcadian 0.544974, Icelandic 0.499720, Mansi 0.130844, Norwegian 0.113273, [SampleName] 0.098527, Tlingit 0.079025)
Cluster 15 [EUR NORTH WEST] ~ 49,85% (Estonian 0.999430, Finnish 0.894305, Russian 0.753776, Norwegian 0.611148, Polish 0.610206, [SampleName] 0.498499, French 0.430381)
Cluster 28 [MAGHREB MED] ~ 0,11% (Iraqi_Jew 0.548570, Saharawi 0.499720, Mozabite 0.120326, Norwegian 0.027651, Iranian 0.024601, Tuscan 0.024440, Maori 0.023108)
Cluster 34 [ENG ES HU] ~ 10,19% (English 0.590638, Spanish 0.555506, Hungarian 0.499720, Polish 0.104413, Norwegian 0.103158, [SampleName] 0.101878, French 0.080995)
Cluster 35 [LEV] ~ 0,57% (BedouinB 0.999430, Jordanian 0.333150, Armenian 0.063614, Amhara 0.058639, Mozabite 0.057830, Crete 0.052075, Agaw 0.039734)
Cluster 49 [EAST MED II] ~ 2,84% (Czech 0.999430, Bergamo 0.518056, Norwegian 0.057229, Polish 0.052518, Tuscan 0.044453, Albanian 0.039241, Greek 0.039086)
Cluster 51 [INDIA CAUCASUS DRIFT] ~ 0,16% (Makrani 0.517992, Balochi 0.025578, Brahui 0.017714, Uygur 0.007912, Sindhi 0.007540, Armenian 0.007201, Burusho 0.006698)
Cluster 56 [BYZANZ DRIFT] ~ 2,63% (Abkhasian 0.999430, Georgian 0.999430, North_Ossetian 0.806748, Adygei 0.735730, Lezgin 0.670897, Armenian 0.608357, Iranian 0.577795)
Cluster 57 [EAST MED III] ~ 0,13% (Samaritan 0.999430, Druze 0.014054, Tuscan 0.012682, Amhara 0.012556, Greek 0.008082, Polish 0.007247, Albanian 0.007093)
[ I ] EUR : ACADIA : WEST MED : EUR EAST : 2xDRIFT : 2xLEV, 45 : 10+ : 20+ : 10+ : 2.5 : <3
K = 62, "SampleName" = 0.000010 0.000010 0.008730 0.229042 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.451174 0.000010 0.000010 0.132879 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.137449 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.017581 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.005353 0.017252 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=62): 1.15267, Converged in 105 iterations (47173.2 sec), Loglikelihood: -41589531.537630.
Cluster 2 [EAST INDIA CHG DRIFT I] ~ 0,87% (Balochi 0.999390, Armenian 0.506760, Tajik 0.499700, Pathan 0.087138, Chechen 0.085164, Burusho 0.082986, Brahui 0.081104)
Cluster 3 [WEST MED] ~ 22,9% (Sardinian 0.999390, Mozabite 0.521435, Saharawi 0.456795, Basque 0.438356, Bergamo 0.349938, Albanian 0.347729, Tuscan 0.301805)
Cluster 11 [EUR NORTH WEST] ~ 45,12% (Finnish 0.999390, Estonian 0.806933, Saami 0.777756, Russian 0.496770, Norwegian 0.495339, 0 0.451174, Czech 0.415855)
Cluster 14 [EUR SCANDINAVIC FRENCH ACADIAN] ~ 13,29% (Icelandic 0.499700, Orcadian 0.499700, French 0.405337, Basque 0.143716, English 0.135978, [SampleName] 0.132879, Norwegian 0.130238)
Cluster 29 [EUR EAST] ~ 13,74% (Polish 0.999390, Icelandic 0.499700, Orcadian 0.499700, English 0.187442, Norwegian 0.171956, Hungarian 0.153120, Czech 0.146842)
Cluster 37 [EAST INDIA CHG DRIFT II] ~ 1,76% (Abkhasian 0.499700, Tajik 0.499700, Burusho 0.035446, Brahmin 0.030179, Lezgin 0.022376, Pathan 0.020998, Norwegian 0.020985)
Cluster 45 [LEV I] ~ 0,53% (Jordanian 0.333137, Czech 0.012120, Crete 0.010091, Yemenite_Jew 0.008743, Iraqi_Jew 0.008162, Bergamo 0.006795, English 0.006302)
Cluster 46 [LEV II] ~ 1,73% (Iranian 0.521398, Palestinian 0.412502, Yemenite_Jew 0.070164, Brahui 0.037912, Turkish 0.034049, Crete 0.029109, Armenian 0.027367)
[ J ] EUR : ACADIA : WEST MED : 3xASHK : LEV, 65 : 5+ : 10+ : 3x8.5 : <1
K = 64, first run, "SampleName" = 0.000010 0.000010 0.000010 0.000017 0.000010 0.084432 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.538322 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.065999 0.000010 0.000010 0.134958 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000012 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.065221 0.000010 0.003960 0.000010 0.000010 0.000010 0.000010 0.000010 0.106529 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010.
K = 64, second run, "SampleName" = 0.000010 0.000010 0.000010 0.000017 0.000010 0.084432 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.538322 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.065999 0.000010 0.000010 0.134958 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000012 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.065221 0.000010 0.003960 0.000010 0.000010 0.000010 0.000010 0.000010 0.106529 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=64): 1.16866, Converged in 132 iterations (61701.7 sec), Loglikelihood: -41500073.124600.
K = 64, third run, "SamleName" = 0.000010 0.000010 0.000010 0.000017 0.000010 0.084432 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.538322 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.065999 0.000010 0.000010 0.134958 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000012 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.065221 0.000010 0.003960 0.000010 0.000010 0.000010 0.000010 0.000010 0.106529 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=64): 1.16866, Converged in 132 iterations (61665.1 sec), Loglikelihood: -41500073.124600.
Cluster 0 ~ 0% (Yemenite_Jew 0.999370, Mozabite 0.911237, Saharawi 0.768081, Fulani 0.351362, Agaw 0.258959, Somali 0.250855, Amhara 0.222685)
Cluster 1 ~ 0% (Piapoco 0.999370, Zapotec 0.499690, Chane 0.360156, Mixtec 0.253263, Mayan 0.201331, Cree 0.029104, Sindhi 0.009819)
Cluster 2 ~ 0% (Eskimo_Chaplin 0.999304, Eskimo_Sireniki 0.499690, Chukchi 0.075385, Aleut 0.060146, Mansi 0.028523, Tlingit 0.023875, Adygei 0.009002)
Cluster 3 ~ 0% (Karitiana 0.999366, Chane 0.055408, Altaian 0.015842, Uygur 0.007557, Pathan 0.004607, Cree 0.004200, Kashmiri_Pandit 0.004176)
Cluster 4 ~ 0% (Ogiek 0.999370, Somali 0.026906, Kikuyu 0.018139, Hadza 0.017792, Agaw 0.009914, BantuKenya 0.008760, Bulala 0.007582)
Cluster 5 [URAL BALT BUL] ~ 8,44% (Tajik 0.999370, Estonian 0.499690, Bulgarian 0.499690, Pathan 0.182895, Kashmiri_Pandit 0.140893, Brahmin 0.129499, Sindhi 0.115310)
Cluster 6 ~ 0% (Saami 0.731499, Cree 0.557249, Mansi 0.137358, Russian 0.062102, Chukchi 0.050595, Tlingit 0.031199, Hazara 0.027067)
Cluster 7 ~ 0% (Mixe 0.999370, Nahua 0.159661, Mixtec 0.122189, Cree 0.036098, Aleut 0.006667, Tu 0.002794, Hazara 0.002791)
Cluster 8 ~ 0% (Esan 0.999370, BantuKenya 0.499690, Yoruba 0.481353, Igbo 0.290187, Kaba 0.139387, Mende 0.102762, Mandenka 0.096390)
Cluster 9 ~ 0% (Even 0.999370, Yakut 0.999370, Mansi 0.226727, Oroqen 0.203296, Hezhen 0.166573, Altaian 0.163043, Kyrgyz 0.148976)
Cluster 10 ~ 0% (Irula 0.999370, Relli 0.499690, Mala 0.376872, Kharia 0.127940, Bengali 0.066325, Cambodian 0.055000, Iranian 0.040868)
Cluster 11 ~ 0% (Chechen 0.999370, Abkhasian 0.499690, North_Ossetian 0.499690, Finnish 0.333130, Adygei 0.184530, Lezgin 0.154341, Turkish 0.088156)
Cluster 12 ~ 0% (Dinka 0.999370, Mursi 0.499690, Bulala 0.408719, Mada 0.315164, Luo 0.193902, Somali 0.173607, Kaba 0.140380)
Cluster 13 ~ 0% (Bougainville 0.999368, Maori 0.065922, Hawaiian 0.059184, Turkish 0.002733, Jordanian 0.002576, Palestinian 0.001450, Mansi 0.001292)
Cluster 14 ~ 0% (Naxi 0.973727, Korean 0.862579, Tu 0.845006, Yi 0.830173, Tibetan 0.746863, Han 0.713113, Xibo 0.710865)
Cluster 15 ~ 0% (Balochi 0.999370, Kashmiri_Pandit 0.017259, Makrani 0.013156, Pathan 0.011876, Cambodian 0.010589, Iranian 0.009424, Sindhi 0.009419)
Cluster 16 ~ 0% (Onge 0.999370, Kurumba 0.024936, Cambodian 0.021596, Kharia 0.020824, Khonda_Dora 0.017501, Burmese 0.014068, Thai 0.004855)
Cluster 17 [EUR NORTH WEST] ~ 53,83% (Norwegian 0.999370, Orcadian 0.999367, Finnish 0.664375, Polish 0.640473, Russian 0.570145, Hungarian 0.544558, [SampleName] 0.538322)
Cluster 18 ~ 0% (Punjabi 0.266562, Kashmiri_Pandit 0.012065, Sindhi 0.010277, Pathan 0.009402, Burusho 0.008001, Cambodian 0.006853, Yadava 0.005502)
Cluster 19 ~ 0% (Tubalar 0.999370, Altaian 0.100038, Mansi 0.091648, Mongola 0.027532, Kyrgyz 0.026835, Daur 0.021248, Lezgin 0.019658)
Cluster 20 ~ 0% (Papuan 0.382670, Burmese 0.006997, Mansi 0.001793, Iranian 0.001091, Mbuti 0.000010, Mende 0.000010, Miao 0.000010); Cluster 21 ~ 0% (Madiga 0.999370, Kurumba 0.922465, Kapu 0.908342, Yadava 0.896101, Bengali 0.647589, Khonda_Dora 0.640226, Brahmin 0.626035)
Cluster 22 ~ 0% (Dusun 0.999370, Atayal 0.999370, Ami 0.999370, Hawaiian 0.399285, Maori 0.172274, Kinh 0.121913, She 0.105613)
Cluster 23 ~ 0% (Lemande 0.999370, Ngumba 0.065199, Tikar_South 0.033631, Igbo 0.033564, Kikuyu 0.028513, Laka 0.016507, Maori 0.014173)
Cluster 24 ~ 0% (Kongo 0.999370, BantuHerero 0.967792, Tikar_South 0.833851, Luhya 0.824219, BantuTswana 0.759656, Ngumba 0.753831, Luo 0.699455)
Cluster 25 ~ 0% (Japanese 0.409111, Korean 0.035232, Tujia 0.011883, Xibo 0.011671, Hezhen 0.010534, Daur 0.008759, Miao 0.008546)
Cluster 26 ~ 0% (Papuan 0.257137, Maori 0.029764, Kharia 0.015844, Bengali 0.004883, Druze 0.004807, Kikuyu 0.002875, Cambodian 0.002141)
Cluster 27 ~ 0% (Sengwer 0.999370, Mursi 0.499690, Luhya 0.114174, Elmolo 0.083168, Bulala 0.070661, BantuKenya 0.065757, Masai 0.061713)
Cluster 28 ~ 0% (Papuan 0.292959, Maori 0.020830, Kurumba 0.019367, Cree 0.001478, Armenian 0.001332, Sindhi 0.000956, Australian 0.000010)
Cluster 29 ~ 0% (Dai 0.999370, Cambodian 0.888281, Lahu 0.848330, Thai 0.795464, Kinh 0.568717, Miao 0.360467, Khonda_Dora 0.317229)
Cluster 30 [EUR SCANDINAVIC FRENCH ACADIAN CHG] ~ 6,6% (Icelandic 0.499690, French 0.348114, [SampleName] 0.065999, Hungarian 0.040759, Basque 0.027958, Kyrgyz 0.026628, Lezgin 0.020420)
Cluster 31 ~ 0% (Gambian 0.999370, Mandenka 0.902990, Mende 0.723043, Fulani 0.648018, Mada 0.235058, Kaba 0.223397, Igbo 0.199381)
Cluster 32 ~ 0% (Brahui 0.523316, Druze 0.501984, Iranian 0.031791, Kashmiri_Pandit 0.031680, Lezgin 0.027952, Palestinian 0.027024, Turkish 0.024500)
Cluster 33 [CZECH BERG SARD BALKANS] ~ 13,5% (Czech 0.999370, Sardinian 0.666250, Bergamo 0.664533, English 0.656423, Albanian 0.309632, Greek 0.255552, Polish 0.218163)
Cluster 34 ~ 0% (Iraqw 0.999370, Aari 0.965095, Hadza 0.680874, Sandawe 0.588861, Amhara 0.525185, Elmolo 0.510645, Somali 0.510301)
Cluster 35 ~ 0% (Iraqi_Jew 0.563397, Makrani 0.561771, Burusho 0.560876, Kashmiri_Pandit 0.097244, Sindhi 0.090335, Pathan 0.087507, Brahui 0.085657)
Cluster 36 ~ 0% (Laka 0.513910, Kaba 0.025216, Bulala 0.017336, Mada 0.010755, Tikar_South 0.008329, Yoruba 0.007760, Maori 0.005564)
Cluster 37 ~ 0% (Quechua 0.999370, Nahua 0.806600, Mayan 0.783195, Zapotec 0.499690, Chane 0.493806, Mixtec 0.409658, Cree 0.117413)
Cluster 38 ~ 0% (Mbuti 0.999370, Hadza 0.024369, Luo 0.018073, Sandawe 0.007890, Mende 0.006485, Kikuyu 0.005713, Elmolo 0.005694)
Cluster 39 ~ 0% (Surui 0.999370, Chane 0.080063, Mongola 0.009262, Aleut 0.007423, Kyrgyz 0.004577, Bengali 0.002542, Hezhen 0.002488)
Cluster 40 ~ 0% (Pima 0.999370, Mixtec 0.059245, Nahua 0.033129, Cree 0.026315, Aleut 0.012117, Mayan 0.011454, Tlingit 0.010422)
Cluster 41 ~ 0% (Kusunda 0.666543, Kharia 0.017379, Bengali 0.008971, Uygur 0.005370, Mansi 0.004977, Burusho 0.003814, Hazara 0.003588)
Cluster 42 ~ 0% (Baka 0.999370, Bakola 0.820333, Biaka 0.316799, Ngumba 0.032091, Hadza 0.011034, Mende 0.007855, Laka 0.001221)
Cluster 43 ~ 0% (Khomani_San 0.999370, Ju_hoan_North 0.999370, BantuTswana 0.238694, Sandawe 0.087429, Hadza 0.056996, Aari 0.032793, BantuHerero 0.031588,)
Cluster 44 ~ 0% (Punjabi 0.266786, Hazara 0.012865, Iranian 0.010865, Tu 0.005001, Kapu 0.004524, Lezgin 0.003463, Bengali 0.003320)
Cluster 45 ~ 0% (Australian 0.333130, Papuan 0.066634, Hawaiian 0.021801, Cambodian 0.014415, Polish 0.008494, Khonda_Dora 0.007414, Tibetan 0.003828)
Cluster 46 ~ 0% (Crete 0.533026, North_Ossetian 0.499690, Jordanian 0.353995, Turkish 0.096092, Relli 0.053612, Druze 0.049465, Armenian 0.045073)
Cluster 47 ~ 0% (Chipewyan 0.999370, Cree 0.089345, Aleut 0.076840, Tlingit 0.056926, Bengali 0.008868, Chukchi 0.008417, Mixtec 0.006978)
Cluster 48 [TUSC SARD BALKANS] ~ 6,52% (Tuscan 0.533625, Sardinian 0.333130, [SampleName] 0.065221, Albanian 0.056509, Bergamo 0.034769, Greek 0.025498, Crete 0.023701)
Cluster 49 ~ 0% (Masai 0.582247, Elmolo 0.013603, Kikuyu 0.009458, Makrani 0.005880, Rendille 0.003751, Agaw 0.003350, Sandawe 0.003014)
Cluster 50 [LEV] ~ 0,4% (Jordanian 0.335203, Iraqi_Jew 0.008773, Iranian 0.008546, Palestinian 0.008497, Armenian 0.006794, Druze 0.006712, Brahui 0.006389)
Cluster 51 ~ 0% (BedouinB 0.999367, Agaw 0.040960, Palestinian 0.040689, Amhara 0.032845, Saharawi 0.021777, Iranian 0.021723, Armenian 0.018650)
Cluster 52 ~ 0% (Kalash 0.999370, Kashmiri_Pandit 0.042303, Lezgin 0.031092, Sindhi 0.029666, Brahmin 0.028491, Hazara 0.024876, Burusho 0.022813)
Cluster 53 ~ 0% (Ulchi 0.999370, Oroqen 0.796084, Itelman 0.484572, Hezhen 0.367403, Altaian 0.194835, Xibo 0.181358, Mongola 0.180291)
Cluster 54 ~ 0% (Bedzan 0.999370, Biaka 0.682581, Bakola 0.179047, Ngumba 0.067270, Elmolo 0.014925, Hadza 0.013093, Tikar_South 0.009188)
Cluster 55 ~ 0% (Daur 0.517015, Tujia 0.506921, Mongola 0.056365, Uygur 0.031675, Korean 0.023142, Hazara 0.016422, Xibo 0.016285)
Cluster 56 [WEST MED PAL] ~ 10,65% (Basque 0.624023, Spanish 0.577245, Palestinian 0.400697, 0 0.106529, Polish 0.076010, Crete 0.050119, Tuscan 0.041344)
Cluster 57 ~ 0% (Rendille 0.519274, Somali 0.035711, Elmolo 0.027308, Agaw 0.023716 Bulala 0.019947, Amhara 0.013789, Masai 0.007985)
Cluster 58 ~ 0% (Australian 0.666249, Khonda_Dora 0.016098, Hawaiian 0.007999, Thai 0.006566, Kurumba 0.005846, Maori 0.005243, Tu 0.004802)
Cluster 59 ~ 0% (Samaritan 0.999370, Bulgarian 0.499690, Polish 0.053824, Albanian 0.039661, Greek 0.039609, Agaw 0.029880, Druze 0.027742)
Cluster 60 ~ 0% (Igorot 0.999370, Hawaiian 0.263864, Maori 0.069268, Miao 0.028748, Kinh 0.021182, Han 0.010968, Daur 0.006393)
Cluster 61 ~ 0% (Georgian 0.999370, Armenian 0.732202, Adygei 0.616945, Abkhasian 0.499690, Greek 0.472267, Lezgin 0.454344, Iranian 0.437237)
Cluster 62 ~ 0% (Sherpa 0.999367, Tibetan 0.235643, Yi 0.060735, Tu 0.053802, Burmese 0.046358, Naxi 0.025570, Kyrgyz 0.024070)
Cluster 63 ~ 0% (Eskimo_Naukan 0.999370, Itelman 0.514808, Eskimo_Sireniki 0.499690, Aleut 0.312434, Tlingit 0.256925, Chukchi 0.244675, Cree 0.029511).
[ K ] Over-Clustering in two or one
K = 59, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.165268 0.000010 0.000010 0.007380 0.000010 0.000010 0.000010 0.000010 0.000010 0.003622 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.004307 0.059493 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.752006 0.001504 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.005909 0.000010 0.000010, CV error (K=59): 1.10695, Converged in 118 iterations (47538.8 sec), Loglikelihood: -41834756.192718.
Cluster 6 ~ 16,53% (Sardinian 0.999420, Samaritan 0.999420, Basque 0.376768, Spanish 0.326445, Albanian 0.317494, Tuscan 0.257425, French 0.248223)
Cluster 9 ~ 0,74% (Lezgin 0.502096, Chechen 0.022215, Pathan 0.013317, Adygei 0.010868, Bulgarian 0.010360, North_Ossetian 0.009360, Uygur 0.008030)
Cluster 15 ~ 0,36% (Jordanian 0.340963, Iraqi_Jew 0.012741, Agaw 0.012416, Yemenite_Jew 0.012096, Turkish 0.008837, Crete 0.008605, Bulgarian 0.006787)
Cluster 25 ~ 0,43% (Orcadian 0.525787, Druze 0.517719, Albanian 0.042434, Crete 0.041542, Bulgarian 0.037509, Tuscan 0.029797, Chechen 0.025480)
Cluster 26 ~ 5,95% (Palestinian 0.693695, Russian 0.499715, Hungarian 0.062730, Polish 0.061274, [SampleName] 0.059493, Iraqi_Jew 0.056872, Czech 0.053756)
Cluster 36 ~ 75,2% (Norwegian 0.999420, Icelandic 0.871976, [SampleName] 0.752006, English 0.744290, Polish 0.714040, Saami 0.709662, Czech 0.700418)
Cluster 37 ~ 0,15% (Tajik 0.515573, Pathan 0.015664, Chechen 0.014080, Burusho 0.013789, Sindhi 0.012476, Uygur 0.008814, Makrani 0.008739)
Cluster 56 ~ 0,59% (Madiga 0.499715, Brahmin 0.015494, Chechen 0.012946, Brahui 0.008440, Kharia 0.008334, [SampleName] 0.005909, Punjabi 0.005683)
K = 60, first run, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.999410 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=60): 1.15631, Converged in 123 iterations (51295.2 sec), Loglikelihood: -41730710.269966.
K = 60, second run, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.999410 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=60): 1.15631, Converged in 123 iterations (51682.8 sec), Loglikelihood: -41730710.269966.
Cluster 22 ~ 99,94% ([SampleName] 0.999410, Norwegian 0.999410, Estonian 0.999410, Icelandic 0.797206, Saami 0.759977, Russian 0.626240, English 0.538525).
K = 61, "SampleName" = 0.264551 0.001395 0.000010 0.000010 0.000395 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.001933 0.000010 0.005123 0.001636 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.692033 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.011987 0.000010 0.000010 0.002099 0.018014 0.000010 0.000010 0.000010 0.000010 0.000333 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=61): 1.14635, Converged in 107 iterations (46301.5 sec), Loglikelihood: -41671852.396626.
Cluster 0 [WEST MED] ~ 26,46% (Sardinian 0.999400, Spanish 0.692001, French 0.511764, Basque 0.491522, Albanian 0.301254, English 0.272232, [SampleName] 0.264551)
Cluster 1 [SIBIRIC INDIA DRIFT] ~ 0,14% (Saami 0.499705, Mansi 0.022338, Burmese 0.007787, Russian 0.007635, Chukchi 0.007222, Finnish 0.006426, Kashmiri_Pandit 0.006330)
Cluster 4 [LEV I] ~ 0,04% (BedouinB 0.999400, Samaritan 0.999400, Jordanian 0.378412, Saharawi 0.194706, Agaw 0.177299, Amhara 0.149370, Druze 0.133601)
Cluster 12 [AMD CHG EAS DRIFT] ~ 0,19% (Mixe 0.999400, Cree 0.034118, Mixtec 0.027210, Chechen 0.010408, Aleut 0.006828, Kashmiri_Pandit 0.004489, Lezgin 0.004071)
Cluster 14 [EAST MED I] ~ 0,51% (Jordanian 0.335289, Czech 0.012604, Armenian 0.010099, Crete 0.010041, Albanian 0.007530, Druze 0.007485, Hungarian 0.007085)
Cluster 15 [SAMARKAND DRIFT] ~ 0,16% (Tajik 0.499705, Pathan 0.017047, Chechen 0.015482, Burusho 0.014354, Sindhi 0.013751, Tubalar 0.013048, Uygur 0.010213)
Cluster 28 [EUR NORTH WEST] ~ 69,2% (Norwegian 0.999400, Estonian 0.995699, Finnish 0.965006, Icelandic 0.878746, Polish 0.735680, Orcadian 0.719370, Russian 0.719021)
Cluster 35 [EAST MED II] ~ 1,2% (North_Ossetian 0.537942, Palestinian 0.342862, Druze 0.035430, Bulgarian 0.028527, Hungarian 0.028019, Turkish 0.026496, Armenian 0.026356)
Cluster 38 [INDIA CAUCASUS DRIFT I] ~ 0,21% (Brahui 0.499705, Kashmiri_Pandit 0.013934, Uygur 0.011698, Armenian 0.010971, Makrani 0.010063, Burusho 0.008821, Icelandic 0.008123)
Cluster 39 [INDIA CAUCASUS DRIFT II] ~ 1,8% (Tajik 0.499705, Palestinian 0.376131, Burusho 0.031807, Maori 0.019944, Altaian 0.019720, Polish 0.018139, [SampleName] 0.018014)
Cluster 44 [INDIA CAUCASUS DRIFT III] ~ 0,03% (Makrani 0.516110, Balochi 0.023926, Icelandic 0.009074, Sindhi 0.008519, Kashmiri_Pandit 0.007993, Armenian 0.007855, Burusho 0.007792)
K = 63, "SampleName" = 0.000010 0.005843 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.003111 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.568202 0.000010 0.000010 0.001881 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.415622 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.003875 0.000906 0.000010 0.000010 0.000010, CV error (K=63): 1.18338, Converged in 115 iterations (53320.7 sec), Loglikelihood: -41554526.902119.
Cluster 1 ~ 0,58% (Sindhi 0.521348, Turkish 0.513432, Pathan 0.056416, Kashmiri_Pandit 0.047527, Chechen 0.043091, North_Ossetian 0.033433, Armenian 0.030981)
Cluster 9 ~ 0,31% (Yadava 0.540505, Hazara 0.016703, Kashmiri_Pandit 0.008934, Adygei 0.008809, Punjabi 0.007795, Tu 0.006974, Makrani 0.006627)
Cluster 30 ~ 56,82% (Finnish 0.999380, Saami 0.791818, Norwegian 0.610462, Russian 0.585707, [SampleName] 0.568202, Icelandic 0.559548, Polish 0.544370)
Cluster 33 ~ 0,19% (Saharawi 0.548417, Mozabite 0.071238, Norwegian 0.009330, Palestinian 0.009096, Amhara 0.008422, Iraqi_Jew 0.007442, Mixtec 0.007145)
Cluster 49 ~ 41,56% (Sardinian 0.999380, Basque 0.994313, French 0.617091, Spanish 0.497024, Bergamo 0.452981, Albanian 0.441151, [SampleName] 0.415622)
Cluster 58 ~ 0,39% (BedouinB 0.999374, Jordanian 0.366399, Palestinian 0.118052, Agaw 0.082969, Mozabite 0.081857, Armenian 0.069614, Saharawi 0.065124)
Cluster 59 ~ 0,09% (Iraqi_Jew 0.559594, Crete 0.521467, Agaw 0.046624, Tuscan 0.040834, Palestinian 0.037845, Greek 0.035224, Albanian 0.031321)
K = 65, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.231921 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.003256 0.008811 0.000010 0.000010 0.000010 0.001900 0.000010 0.000010 0.000010 0.000010 0.720475 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000261 0.000010 0.001100 0.000010 0.000010 0.031706 0.000010, CV error (K=65): 1.18127, Converged in 212 iterations (103941 sec), Loglikelihood: -41360222.591173.
Cluster 9 ~ 23,19% (Sardinian 0.999360, Tuscan 0.664337, Basque 0.508841, Spanish 0.430356, Bergamo 0.379189, Albanian 0.371927, French 0.332709)
Cluster 17 ~ 0,33% (Yadava 0.573155, Bengali 0.504927, Kashmiri_Pandit 0.026691, Brahmin 0.025665, Tu 0.013059, Hazara 0.012946, Burusho 0.011548)
Cluster 18 ~ 0,89% (Saami 0.999360, Mansi 0.067626, Russian 0.038561, Finnish 0.030824, Altaian 0.019669, Chukchi 0.014030, Tlingit 0.013572)
Cluster 22 ~ 0,19% (Tajik 0.499685, Burusho 0.014377, Chechen 0.014258, Sindhi 0.013605, Pathan 0.010222, Makrani 0.009219, Altaian 0.009063)
Cluster 27 ~ 72,05& (Estonian 0.994835, Norwegian 0.991289, Finnish 0.935222, Icelandic 0.872727, Polish 0.778175, Russian 0.773087, Orcadian 0.749853)
Cluster 58 ~ 0,03% (Balochi 0.999360, Makrani 0.026049, Kashmiri_Pandit 0.018737, Sindhi 0.010025, Iranian 0.008991, Punjabi 0.008183, Burusho 0.007743)
Cluster 60 ~ 0,11% (Mixe 0.999360, Nahua 0.280850, Zapotec 0.153726, Mixtec 0.137819, Mayan 0.049230, Aleut 0.017097, Chechen 0.011717)
Cluster 63 ~ 3,17% (Palestinian 0.404750, Jordanian 0.333127, Yemenite_Jew 0.068436, Iraqi_Jew 0.065141, Crete 0.047539, Saharawi 0.032500, [SampleName] 0.031706)
K = 66, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.999350 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010, CV error (K=66): 1.18274, Converged in 173 iterations (88286.9 sec), Loglikelihood: -41332278.897342.
Cluster 32 ~ 99,94% ([SampleName] 0.999350, Tuscan 0.524672, Bergamo 0.042559, Czech 0.038328, Albanian 0.037397, Saharawi 0.030193, North_Ossetian 0.029569)
K = 68, "SampleName" = 0.000010 0.000010 0.000010 0.025995 0.000010 0.000010 0.000010 0.000012 0.001213 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.016946 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.748575 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.020176 0.000010 0.000010 0.007481 0.000010 0.000010 0.000010 0.140637 0.000010 0.000010 0.000388 0.000010 0.001408 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.036600 0.000010, CV error (K=68): 1.22838, Converged in 88 iterations (48039.2 sec), Loglikelihood: -41229111.269241.
Cluster 3 ~ 2,6% (Turkish 0.516722, Jordanian 0.342108, Iraqi_Jew 0.037427, Rendille 0.030612, Chechen 0.029126, Druze 0.027941, Albanian 0.027833)
Cluster 8 ~ 0,12% (Makrani 0.499670, Brahui 0.014573, Icelandic 0.011211, Czech 0.008076, Uygur 0.006471, Sindhi 0.006403, Burusho 0.006032)
Cluster 17 ~ 1,69% (Tuscan 0.516762, Punjabi 0.249840, Brahmin 0.040864, Chukchi 0.033695, North_Ossetian 0.033591, Chechen 0.029975, Czech 0.029458)
Cluster 33 ~ 74,86% (Norwegian 0.960873, Finnish 0.954299, Estonian 0.935961, Icelandic 0.814750, [SampleName] 0.748575, Orcadian 0.748059, Russian 0.745152)
Cluster 46 ~ 2,02% (Hungarian 0.508969, Bulgarian 0.499670, Polish 0.061747, Czech 0.054604, Chechen 0.041582, Bergamo 0.036180, Russian 0.028906)
Cluster 49 ~ 0,75% (Iranian 0.515377, Jordanian 0.341642, Czech 0.035834, Iraqi_Jew 0.030367, Druze 0.025726, Palestinian 0.023831, English 0.023669)
Cluster 53 ~ 14,06% (Sardinian 0.999330, Basque 0.321351, Spanish 0.269296, Albanian 0.228447, Bergamo 0.219264, French 0.196899, English 0.172297)
Cluster 56 ~ 0,04% (Maori 0.999330, Hawaiian 0.061622, Adygei 0.005298, Tuscan 0.004723, Orcadian 0.004704, Amhara 0.004015, Turkish 0.003980)
Cluster 58 ~ 0,14% (BedouinB 0.999330, Agaw 0.057209, Palestinian 0.043846, Amhara 0.043784, Saharawi 0.038849, Iraqi_Jew 0.033930, Iraqw 0.033812)
Cluster 66 ~ 3,66% (Balochi 0.999330, Palestinian 0.374462, [SampleName] 0.036600, Iraqi_Jew 0.022644, Brahui 0.017701, Polish 0.017140, Orcadian 0.013677)
K = 72, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.589165 0.001401 0.000010 0.000010 0.382351 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.007515 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.013252 0.000968 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.004697, CV error (K=72): 1.26566, Loglikelihood: -40873680.466408.
Cluster 5 ~ 58,92% (Norwegian 0.999290, Finnish 0.999290, Estonian 0.998422, [SampleName] 0.589165, Icelandic 0.575622, Orcadian 0.569098, Czech 0.538700).
Cluster 6 ~ 0,14% (Brahui 0.516423, Kashmiri_Pandit 0.014780, Uygur 0.011731, Armenian 0.011714, Makrani 0.010469, Burusho 0.010345, Balochi 0.008307).
Cluster 9 ~ 38,24% (Basque 0.999290, Bergamo 0.999290, Spanish 0.767286, Tuscan 0.402459, [SampeName] 0.382351, Icelandic 0.365903, Orcadian 0.358073).
Cluster 45 ~ 0,75% (Lezgin 0.504768, Pathan 0.012855, Bulgarian 0.010896, Abkhasian 0.010169, Uygur 0.008627, Armenian 0.007685, [SampleName] 0.007515).
Cluster 56 ~ 1,33% (Sardinian 0.343854, Albanian 0.015692, [SampleName] 0.013252, Bulgarian 0.010617, Czech 0.009672, Tuscan 0.008653, Crete 0.008050).
Cluster 57 ~ 0,1% (Turkish 0.499649, Armenian 0.016085, Bulgarian 0.015535, Crete 0.011432, Iraqi_Jew 0.010044, Hungarian 0.009113, Georgian 0.009053).
Cluster 71 ~ 0,47% (Jordanian 0.335397, Armenian 0.012194, Czech 0.011467, Crete 0.010306, Somali 0.009430, Brahui 0.007916, Palestinian 0.007880).
K = 80, "SampleName" = 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.000010 0.999210 0.000010 0.000010 0.000010, CV error (K=80): 1.33404, Loglikelihood: -40300403.723663.
Cluster 76 ~ 99,92% ([SampleName] 0.999210, Bulgarian 0.513275, Czech 0.039097, Chechen 0.034689, Albanian 0.034354, Turkish 0.034276, Hungarian 0.033031).
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E-Mail kriswagenseil [at] gmx [point] de